Vigna radiata (mung bean): 106776304
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Entry
106776304 CDS
T04126
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106776304
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vra01009
]
106776304
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106776304
Protein phosphatases and associated proteins [BR:
vra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106776304
Spliceosome [BR:
vra03041
]
Common components
Common spliceosomal components
SR proteins
106776304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
106776304
NCBI-ProteinID:
XP_014519196
UniProt:
A0A1S3VLF8
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All DBs
Position
11:6794113..6797131
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AA seq
245 aa
AA seq
DB search
MADSPPRRNSRSPSPWRAQSRSRSRSRSRPRSRSRSRSFEKQRPRSRSRSRGRSRSRSND
RMETKNTGNTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTV
EDANRCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRDYGYRGDRGRYRGGG
SGRDDYAYRGERGRSPRRSPYRGGRDYSPRHSPPPYGGRTRRDRSRSLPYSPYGSPDRRY
ARGSR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctccgccgagaaggaattcaaggtccccttccccatggagggctcagtca
agatcgaggtctaggtctagatctaggccaaggtctaggtcccggtcaagatcatttgaa
aaacaaaggccaaggtctcgctccagaagtcgtggaagatcaagatcaagaagtaatgac
aggatggagactaaaaatacagggaatacactttatgtcactggtctatcttcaagggtc
actgagagagacctggaggagcatttctctaaagagggaaaggttgcttcgtgttttctt
gtggtggagccccgtactcgcatttctcgaggttttgcttttattacaatggataccgtt
gaggatgcaaaccgctgcatcaaatatctcaatcaatcagttttagagggtcgctatatc
actgttgagcggtcccgaagaaagcgtgcaagaactcctacacctggacactatcttggc
ctgaaaagtactcgagactatggatatcgcggtgaccgcggaaggtatagaggaggtgga
tctggtcgtgatgattatgcatatcgaggagagcgtggaaggtctccaaggcgctcacct
tatcgaggtggtagagattattctccgaggcattcaccgccaccttatggcggaagaact
aggagggataggtccaggtcacttccatactctccatatggtagcccagacaggaggtat
gctcgtggatctaggtga
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