Vigna radiata (mung bean): 106776462
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Entry
106776462 CDS
T04126
Name
(RefSeq) carbon catabolite repressor protein 4 homolog 4 isoform X3
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106776462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106776462
Enzymes [BR:
vra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106776462
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106776462
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106776462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
106776462
NCBI-ProteinID:
XP_014519410
UniProt:
A0A1S3VM94
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Position
11:8118633..8123974
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AA seq
392 aa
AA seq
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MLKALGARAVLCSNSSSSTSVVRKMSSAPASRKFVSVEGSDIHSRSKPDGFRFSLVSYNI
LAQVYVKSSSFPHSPSSSLKWKPRSNTILEVLKDLGADFFCLQEVDEFESFYKGNMQNLG
YSSIYMKRSGQKRDGCGLFYKHDCAELLLEEKIEYNDLVKSIPDGNSSNDDDHTNIQTVH
ADKQKDVEPKNGSKSNTEDRGDPNDPRVRLKRDCVGIMAAFKFKDPSRHIVIVANTHLYW
DPEWADVKLAQAKYLLFRLAKFKTLVSDRYECIPEVIVAGDFNSQPGDTVYQYLVSGNPS
SNLMLNCLDESPPIPLCSVYASTRGEPPFTNYTPGFTGTLDYILFSPSDHIKPISFLELP
DSDAADIVGGLPNFSYPSDHLPIGAEFEIIKE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagcattgggtgcacgtgcagtgctatgctcgaactcttcttcttccactagt
gttgtaaggaagatgagttctgcgccggcatctcgcaagttcgtttccgtggaaggctca
gacatacattccagaagtaaacctgatggcttcagattcagtcttgtttcgtataacata
ttggcgcaggtttatgtgaagagctcgtcgttcccgcattctccatcttcgtctctcaaa
tggaaacctcgttcaaacacaattttggaagttctcaaggacttgggagctgactttttc
tgcctgcaggaagttgatgaatttgaaagcttttacaaaggaaacatgcagaatttagga
tattcttcgatttatatgaagagaagtggtcaaaagcgtgatgggtgtggcttattttac
aagcatgactgtgcagagttgctcttagaggagaaaattgaatacaatgatcttgtaaag
tccattccagatgggaactcttcaaacgatgatgatcacaccaatattcagactgtccat
gctgataaacaaaaggacgtggagcccaaaaatggttctaaatcgaatacagaagatcgt
ggagatcccaatgacccccgtgtgagacttaagcgtgattgtgttggaataatggctgca
ttcaaattcaaagatccctctcgtcatattgttattgtggccaacacacatctttattgg
gatcctgaatgggcggatgtcaagcttgcacaagctaaatatcttctattccgcctggca
aaatttaaaacactggtctcagatagatatgaatgcatacctgaagtcattgtggctggt
gacttcaattctcagccaggagacacggtctaccagtaccttgtatccggaaatccttca
tcaaacctgatgctgaactgtttagacgagtcgcctcctattcccttatgtagtgtctat
gcttctacaagaggagaaccaccatttacaaactacacacctggcttcactggaacactc
gactatattttattttccccttctgatcacattaaaccaattagttttcttgagcttcca
gactctgatgcagccgatattgttggtggactgccaaacttcagttatcccagtgatcat
ctaccaattggtgctgagtttgaaatcatcaaggagtaa
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