Vigna radiata (mung bean): 106777108
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Entry
106777108 CDS
T04126
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106777108
03036 Chromosome and associated proteins [BR:
vra03036
]
106777108
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
106777108
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106777108
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
106777108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_19
AAA_30
ResIII
UvrD-helicase
AAA_22
Mov-10_helical
AAA_16
Helicase_RecD
UvrD_C
DEAD
ATPase_2
AroM
AAA_5
AAA
Motif
Other DBs
NCBI-GeneID:
106777108
NCBI-ProteinID:
XP_014520114
UniProt:
A0A1S3VPW9
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All DBs
Position
11:850086..855025
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AA seq
889 aa
AA seq
DB search
MSTAGWSDEERSVIGDKAEIGFLDFEEERSVCSDFDYEGAPVVVSAPFPFVDGKPQSVYI
GDTAVDLITVRNTTDEPVDLWSVHIFASNPTDSFTLSLTEPLPENSNADGEQSCLESFTL
EDRVLQPRENLKVWLSCKTKEIGMCSSVIYFDAGDEKIERVVFLLVEDKISKSLAAKRPY
SRAKKKDKFVVDNYVPGSRPPAKPTRRYINRLPVYHIPRDMRELLENNQIPQVVEEGLTG
RTYSSYFKTLIIMEEIQLEEDMRIYDMESISMRKRNNRFLSMEVPGLAERRPSLVHGDRI
FVKLAYDNSNRQPYEGFIHRVEADEIYLKFDPEYNLYHYHKDENTYDVHFTYNRINMRRL
YQAAEATENLGTDILFPSTSKKRHIKTTALVPISGTFNEEQICSIKMILGCKGAPPYLIH
GPPGTGKTRTIVETILQLYKYHKNARILVCAPSNSAADYILERLLTQQDIELRENEIFRL
NASTRPYEDVKPEIIRFCFFDDMVFKCPPVNALSYYKIIISTYMSASLLYAEDVARGHFS
HIFLDEAGQASEPETLIPVSHLCTMKTVVVLAGDQLQLGPVIYSKKADEFGLGVSYMERL
SGLPLYASGDTNYVTRLVRNYRCHPAILHLPSKLFYCGELLACRDSTTFLTMGELLPNKE
FPILFCGIQGCDEREGNNPSWFNRIEASKVIEVVNRLIVGGNIKEENIGIITPYRQQVSK
IKQTLENLDMPNIKVGSVEQFQGQEKEVIIISTVRSTIKHNEFDRVHCLGFLSNYRRFNV
AITRAISLLVIIGNPHIICKDENWSQMLWYCVDNSSYQGCSLPERVEPYDDEDTGENPYS
TEDNAWPSNNAEWGQDSSNNAEWDQDSSQIGLPKPVTDEAEWSDGWRSN
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgccgggtggtcagatgaggaacgctctgtcattggagataaggctgaaatt
gggtttctagattttgaggaagagagatctgtttgcagtgactttgattatgaaggggct
cctgttgttgtatctgccccatttccatttgtggatggcaagcctcaatctgtatatata
ggggacactgctgtggatttaataaccgttaggaatactactgatgaaccagtggacctg
tggagtgttcatatttttgcctcaaatcctacggatagtttcactctctctcttacagaa
cctctaccggaaaattcaaatgcagatggagaacagagctgcttagaatctttcactttg
gaggacagggtgcttcaacctcgtgaaaacttgaaagtatggctgtcttgcaagacaaaa
gaaattggcatgtgctcatcagtcatatattttgatgctggagatgaaaaaattgaaagg
gtggttttcctcttagttgaagacaaaatctccaagtctttggctgctaagaggccctat
tcaagagcaaagaaaaaggacaaatttgttgtggataattatgttccaggctcacgtcct
ccagcgaagccaactcgaagatacataaacaggcttccagtatatcacattcccagggac
atgagagagttgcttgagaataatcagatccctcaagttgttgaagaaggtcttactgga
aggacttattcatcttatttcaaaacattaataataatggaagagatccagttggaggaa
gacatgaggatttatgatatggaatctatatcgatgagaaagaggaacaatcgatttttg
tctatggaggttcctgggcttgctgagagaagaccatctctggttcatggggatcgtata
tttgttaagctcgcatatgataatagcaacagacagccttatgagggctttatccaccga
gttgaagctgatgaaatttatttgaagtttgatcctgaatataacctttaccattaccac
aaggacgaaaatacatatgatgttcacttcacctataacaggatcaatatgagaaggcta
tatcaagcagctgaggcaacagaaaacttgggtaccgacatcctctttccatctacatca
aaaaagagacacattaaaactactgctctagtacccatatctggtacttttaacgaggag
caaatttgttcaatcaaaatgattcttggttgcaaaggtgccccaccttatttgattcat
ggaccccctggtacgggaaagacaaggacaatagtagaaacaatcctgcagctctacaaa
tatcacaagaatgctcggattcttgtgtgtgcaccctcaaatagtgcagcagactacata
ctggagagactccttactcaacaggacattgagttgcgagaaaatgaaatattcaggctc
aatgcatctaccaggccatacgaagatgttaaaccagaaattatccgcttctgcttcttt
gatgatatggtatttaagtgtcccccagtgaacgccctcagttattataagatcataata
tccacatatatgagtgcgtctcttctttatgctgaagatgttgcccgtggtcacttttcc
catatttttttggacgaggctggccaagcttctgaacctgaaaccttgatccctgtatcc
cacctctgcacaatgaaaactgttgttgttctggctggagaccaattgcaattgggtcca
gtaatatattccaagaaagcagatgagtttggtttgggggtttcatatatggaacgattg
tctggactcccgctatatgccagtggagatactaattatgtaacacgattggttcggaac
tatcgatgtcacccagcaatattgcatcttccttcaaagttgttctattgtggggaattg
cttgcttgtagagattccacaactttcctgacgatgggggagttgctacctaataaggaa
ttccctattcttttctgtggcatccaaggatgcgatgaaagagaaggaaataacccatcg
tggtttaaccgcattgaagccagtaaggttatagaagttgtcaatagactgattgtagga
gggaacataaaggaggaaaacattggcataataactccatataggcaacaagtgtcaaaa
ataaaacagacacttgaaaatctagatatgcctaacatcaaagtgggtagtgtcgagcaa
ttccaaggacaagagaaggaggttattatcatatcaacagttcgatcaactatcaaacat
aacgagtttgacagagtccactgtcttggctttttgagcaattatagaaggtttaacgtg
gctataactcgtgctatatcattgctggttataattgggaatccgcatataatctgcaag
gatgaaaattggagccaaatgttgtggtactgtgtagacaattcatcttaccagggttgt
tctcttcctgaaagggtggaaccttatgacgatgaggacactggagagaatccatactcg
actgaagataatgcgtggccctcaaataacgcagaatggggtcaagattcatcaaacaat
gcagaatgggaccaagattcttcccagatagggctccctaaacctgttaccgatgaagct
gagtggtctgatggctggagaagtaattaa
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