Vigna radiata (mung bean): 106777207
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Entry
106777207 CDS
T04126
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106777207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106777207
Spliceosome [BR:
vra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106777207
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
106777207
NCBI-ProteinID:
XP_014520240
UniProt:
A0A1S3VPC2
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Position
11:complement(1142035..1147237)
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AA seq
863 aa
AA seq
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MDNRVKSEKRSKDRHLERDEKYHRVSKDHHNHHSDIKHKHDHKSRDKDRGRTYDRDGSKD
RSRAYDREGSKDRDRTYDREGSRDRDRAHDSEGSKDRDKAYERESGKDRSKVKRDDGRED
LVESRYSSHSHKRKEREHSEDRDCEDKKIRVSEDSKEGKRERRKFGDKVKKEEEEDGDNN
IRGIHEGKVKEEDTEGVHGSASSKDTVSVQNGALGSLAVAPMSVLETSLAPPPPFPIKVS
LNSTTNENKGVSITRSHEVTGKSSTDGSSSTAGKAGSLSIDALAKAKKALQMQKELSEKL
KKIPQLNKSSTQNSHGSSNMGSNSGSASAVMPKGSSSASFGHVANMSIFPSAASANSPAS
GSSAAGIANATLPNLEAVRRAQELAARMGFRQDPQFAPLINMFPGQMVTDIAILQKPTKA
PVLRLDAQGREIDENGNVINVTKPTNLSTLKVNINKQKKEAFEILQPVLDVDPESNPYFD
ASMGINKTKILRPKRMNFQFVEEGKWSRDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAA
PDINPNLIEITERVVIKEKPKDQIPDIEWWDVPLVHSGNYGDIDTGTIGEDKLKIESITF
LVHHPRPIEPPAEPTPPPPQPLKLTKQEQKKLRTQRRIAKEKDRQEMIRQGVIEPPKPKV
KISNLMKVLGSEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAELREKKQRKLFDD
PNTLETIVSLYRINDLSNPKARFRVDVNAQENRLSGRAVICDGISVVVVEGGSKSIKRYG
KLMLRRINWSDFSKEKEENEDSDDEKPANKCVLVWQGSVAKPNFNRFTVHDCITEAAARK
VFVDAGVPHYWDQAVNYVEDEAL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagagtcaaatctgaaaagagaagcaaagatcgacacctggaacgcgatgaa
aaataccatcgtgtttccaaagaccaccacaatcatcattcagatataaaacacaagcat
gaccacaaatccagggataaggataggggtagaacttatgacagagatggaagcaaggac
aggagtagagcttatgatagagaaggaagcaaggatagagataggacttatgacagagaa
ggaagcagggatagggatagagctcatgacagtgaaggaagcaaggatagggacaaggct
tacgaaagagagagtggcaaagataggtcaaaggtgaagcgtgatgatggtagggaagat
ttggtggagtcacgatactcctcacattctcataagcggaaagagagggagcacagcgaa
gacagagactgtgaggataagaaaattagggtttctgaggacagcaaggaagggaagagg
gaacggaggaaatttggggataaagtcaagaaggaggaagaagaagatggtgataataat
attagaggcattcatgagggcaaggttaaggaggaagacactgaaggtgtccatggctca
gcttcttccaaagacactgtatctgtccaaaacggtgccttgggatcacttgctgtggcg
cccatgagtgtgcttgagacatctttagctcctcctccaccatttcctatcaaggtatct
ttgaattctaccacaaatgaaaataagggcgttagtattaccaggtctcatgaggttact
ggaaaatctagtacagatgggtcatcttcaactgctggaaaagctggaagcctgtcgatt
gatgctttagctaaggctaagaaagctttacaaatgcagaaagagttgtcagaaaagctg
aagaaaattcctcagttgaataagagttctacccaaaattcacatggaagctcaaacatg
ggttcaaacagtggatctgcctctgcagtcatgccaaaaggttccagctcagcttctttt
ggccatgttgcaaatatgtcaattttcccctctgctgcttctgctaattctccagcaagt
ggcagtagtgctgctggtattgcaaatgcaactcttcccaatttggaagctgtcaggcgg
gctcaggagcttgctgctaggatgggattccgtcaagatccacaatttgctcctctgata
aatatgtttcctggtcagatggtaacagatattgccattctgcaaaaaccaacaaaggcc
cctgttcttcgacttgatgctcaggggcgggaaatagatgaaaatggaaatgttattaat
gtgaccaagcccaccaaccttagcacattaaaggtcaacattaacaaacaaaagaaagaa
gcatttgaaatactacaacctgtattggatgtcgatcccgaatcaaatccttattttgat
gcaagtatgggtatcaacaaaacaaagatcctgcgacccaagaggatgaatttccaattt
gtggaggaaggaaaatggtcaagagatgctgaaacaataaaattgaagagtaaatttgga
gaagctcaagcgaaagagcacaaggccaaacaagcacagttggcaaaggcaaaggctgct
cctgatataaatcccaacttaatagaaataacagagagagttgtaattaaagaaaaaccc
aaggaccaaattccagacatcgagtggtgggacgtgcctcttgtgcattctggaaattat
ggagacattgatactggaaccataggcgaggataagctgaaaatagaaagcatcactttc
cttgtgcatcatcctcgtcctattgaaccacctgctgagcccactcctccaccacctcaa
ccgctcaaactaactaagcaagagcagaagaaactccggacacaaaggcgaatagccaag
gagaaagatcggcaagagatgatcagacagggtgtcatagaaccaccaaaaccaaaggtc
aagattagcaatttaatgaaagtacttggctctgaagcaactcaagatcctacacggcta
gaaaaggaggtacgcagcgcagctgccgagcgtgagcaggctcacatagatcggaatatt
gcacgcaagcttactccagccgagctccgggaaaagaagcagagaaagctgtttgatgac
ccaaatacactggagacaattgtctctctctacagaataaatgacctctcaaatccaaag
gcccgtttcagagttgatgttaacgctcaagagaaccgtttgagtggacgtgctgtgatt
tgcgatggtatcagtgttgttgttgttgaaggtggaagcaagtcgataaagaggtatggg
aaactcatgcttagacgcattaattggagtgatttttcaaaagagaaagaagaaaatgaa
gattcagatgatgaaaagcctgccaataagtgtgttctggtgtggcaaggaagtgttgca
aaacccaacttcaataggttcactgttcatgactgcatcactgaagcagctgcccgaaaa
gtttttgtggatgccggtgttccccattattgggaccaagccgtcaactacgtagaagat
gaagccctttga
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