KEGG   Vigna radiata (mung bean): 106777207
Entry
106777207         CDS       T04126                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106777207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vra03041]
    106777207
Spliceosome [BR:vra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    106777207
SSDB
Motif
Pfam: PRP3 Prp3_C SabA_adhesion
Other DBs
NCBI-GeneID: 106777207
NCBI-ProteinID: XP_014520240
UniProt: A0A1S3VPC2
LinkDB
Position
11:complement(1142035..1147237)
AA seq 863 aa
MDNRVKSEKRSKDRHLERDEKYHRVSKDHHNHHSDIKHKHDHKSRDKDRGRTYDRDGSKD
RSRAYDREGSKDRDRTYDREGSRDRDRAHDSEGSKDRDKAYERESGKDRSKVKRDDGRED
LVESRYSSHSHKRKEREHSEDRDCEDKKIRVSEDSKEGKRERRKFGDKVKKEEEEDGDNN
IRGIHEGKVKEEDTEGVHGSASSKDTVSVQNGALGSLAVAPMSVLETSLAPPPPFPIKVS
LNSTTNENKGVSITRSHEVTGKSSTDGSSSTAGKAGSLSIDALAKAKKALQMQKELSEKL
KKIPQLNKSSTQNSHGSSNMGSNSGSASAVMPKGSSSASFGHVANMSIFPSAASANSPAS
GSSAAGIANATLPNLEAVRRAQELAARMGFRQDPQFAPLINMFPGQMVTDIAILQKPTKA
PVLRLDAQGREIDENGNVINVTKPTNLSTLKVNINKQKKEAFEILQPVLDVDPESNPYFD
ASMGINKTKILRPKRMNFQFVEEGKWSRDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAA
PDINPNLIEITERVVIKEKPKDQIPDIEWWDVPLVHSGNYGDIDTGTIGEDKLKIESITF
LVHHPRPIEPPAEPTPPPPQPLKLTKQEQKKLRTQRRIAKEKDRQEMIRQGVIEPPKPKV
KISNLMKVLGSEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAELREKKQRKLFDD
PNTLETIVSLYRINDLSNPKARFRVDVNAQENRLSGRAVICDGISVVVVEGGSKSIKRYG
KLMLRRINWSDFSKEKEENEDSDDEKPANKCVLVWQGSVAKPNFNRFTVHDCITEAAARK
VFVDAGVPHYWDQAVNYVEDEAL
NT seq 2592 nt   +upstreamnt  +downstreamnt
atggacaatagagtcaaatctgaaaagagaagcaaagatcgacacctggaacgcgatgaa
aaataccatcgtgtttccaaagaccaccacaatcatcattcagatataaaacacaagcat
gaccacaaatccagggataaggataggggtagaacttatgacagagatggaagcaaggac
aggagtagagcttatgatagagaaggaagcaaggatagagataggacttatgacagagaa
ggaagcagggatagggatagagctcatgacagtgaaggaagcaaggatagggacaaggct
tacgaaagagagagtggcaaagataggtcaaaggtgaagcgtgatgatggtagggaagat
ttggtggagtcacgatactcctcacattctcataagcggaaagagagggagcacagcgaa
gacagagactgtgaggataagaaaattagggtttctgaggacagcaaggaagggaagagg
gaacggaggaaatttggggataaagtcaagaaggaggaagaagaagatggtgataataat
attagaggcattcatgagggcaaggttaaggaggaagacactgaaggtgtccatggctca
gcttcttccaaagacactgtatctgtccaaaacggtgccttgggatcacttgctgtggcg
cccatgagtgtgcttgagacatctttagctcctcctccaccatttcctatcaaggtatct
ttgaattctaccacaaatgaaaataagggcgttagtattaccaggtctcatgaggttact
ggaaaatctagtacagatgggtcatcttcaactgctggaaaagctggaagcctgtcgatt
gatgctttagctaaggctaagaaagctttacaaatgcagaaagagttgtcagaaaagctg
aagaaaattcctcagttgaataagagttctacccaaaattcacatggaagctcaaacatg
ggttcaaacagtggatctgcctctgcagtcatgccaaaaggttccagctcagcttctttt
ggccatgttgcaaatatgtcaattttcccctctgctgcttctgctaattctccagcaagt
ggcagtagtgctgctggtattgcaaatgcaactcttcccaatttggaagctgtcaggcgg
gctcaggagcttgctgctaggatgggattccgtcaagatccacaatttgctcctctgata
aatatgtttcctggtcagatggtaacagatattgccattctgcaaaaaccaacaaaggcc
cctgttcttcgacttgatgctcaggggcgggaaatagatgaaaatggaaatgttattaat
gtgaccaagcccaccaaccttagcacattaaaggtcaacattaacaaacaaaagaaagaa
gcatttgaaatactacaacctgtattggatgtcgatcccgaatcaaatccttattttgat
gcaagtatgggtatcaacaaaacaaagatcctgcgacccaagaggatgaatttccaattt
gtggaggaaggaaaatggtcaagagatgctgaaacaataaaattgaagagtaaatttgga
gaagctcaagcgaaagagcacaaggccaaacaagcacagttggcaaaggcaaaggctgct
cctgatataaatcccaacttaatagaaataacagagagagttgtaattaaagaaaaaccc
aaggaccaaattccagacatcgagtggtgggacgtgcctcttgtgcattctggaaattat
ggagacattgatactggaaccataggcgaggataagctgaaaatagaaagcatcactttc
cttgtgcatcatcctcgtcctattgaaccacctgctgagcccactcctccaccacctcaa
ccgctcaaactaactaagcaagagcagaagaaactccggacacaaaggcgaatagccaag
gagaaagatcggcaagagatgatcagacagggtgtcatagaaccaccaaaaccaaaggtc
aagattagcaatttaatgaaagtacttggctctgaagcaactcaagatcctacacggcta
gaaaaggaggtacgcagcgcagctgccgagcgtgagcaggctcacatagatcggaatatt
gcacgcaagcttactccagccgagctccgggaaaagaagcagagaaagctgtttgatgac
ccaaatacactggagacaattgtctctctctacagaataaatgacctctcaaatccaaag
gcccgtttcagagttgatgttaacgctcaagagaaccgtttgagtggacgtgctgtgatt
tgcgatggtatcagtgttgttgttgttgaaggtggaagcaagtcgataaagaggtatggg
aaactcatgcttagacgcattaattggagtgatttttcaaaagagaaagaagaaaatgaa
gattcagatgatgaaaagcctgccaataagtgtgttctggtgtggcaaggaagtgttgca
aaacccaacttcaataggttcactgttcatgactgcatcactgaagcagctgcccgaaaa
gtttttgtggatgccggtgttccccattattgggaccaagccgtcaactacgtagaagat
gaagccctttga

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