Vigna radiata (mung bean): 106777690
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Entry
106777690 CDS
T04126
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106777690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106777690
03012 Translation factors [BR:
vra03012
]
106777690
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106777690
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106777690
Translation factors [BR:
vra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106777690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
dsrm
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_11
Lectin_leg-like
PhoH
T2SSE
Rad17
Motif
Other DBs
NCBI-GeneID:
106777690
NCBI-ProteinID:
XP_014520882
UniProt:
A0A1S3VRR9
LinkDB
All DBs
Position
11:complement(18441639..18475939)
Genome browser
AA seq
1106 aa
AA seq
DB search
MSPRIPFLAMDSSLPVHVDDADKGFNCDADKGFNCDADKGNSSSDFPSEDWKQKLNMLLN
DQSKQELVSREKKDRRDFQQIQTLASKMGLYSHMYAKVVVVSKAPLPNYRYDLDDKRRLR
EVNLPTTLLRQVDGYLQEYLTQKSRRKESFSDLWCATPADSGGTHEGLFEPPQSLSCSRA
VVDKFLCQRSSQMRDQQRTWQESPDGSKTLEFRSSLPAYKEKEAILSAISRNQVLIISGE
TGCGKTTQVPQFILESEIELVRGAVCNIICTQPRRIAAISVSERVASERGEKLGETVGYK
VRLEGMQGRDTHLLFCTTGILLRRLLDDKKLKGITHIIVDEIHERGINEDFLLVVLKDLL
AFRPELKLILMSATLDAELFSSYFNNASTMKIPGLTYPVRTHFLEDILEMSGYKLTPDNQ
IDDYGPERIWKMNKQLPGKRKSQLSSAVEDVLKAADFNYYSPQTRESLSCWNPDFIGFNL
IQYILCNICEHERPGAILVFMIGWDDINALKEKLLTHPVLSDPNRVLLVMCHGSMDSLEQ
RLIFQEPEDGVRKIVLATNIAETSITINDIVFVIDCGKAKESSYDALNNTSCLLPTWISK
VSVQQRRGRAGRVQPGECYHLYPRCVYDSFTEHQLPEILRMPLQSLCLQIKSLKLGSISE
FLSRALQSPEILAVQNAIEYLKTIGALDESENLTILGRHLAVLPMEPKLGKMLIFGVIFN
CLDPILTIVAGLTVRCPFLTPSDKKDLAQAAKSQFSHDYSDHLAIVRAYDSWKDAEIDNA
GHEYCWKNFLSPQSMKVIEALRVEFLSLLKDIGLVDRNMSSCNAWSYDMYLIRAAICYGL
YPGICSVVHKDKSFSLKTTDDGKVFLHSNSVNARESRIPYPWLVFNEKIKVNSVFLRDST
AVPDSVVLLFGGRISKGDTDGHLKMSGGYLEFFVKPAVADMYQSIRKDLDRLIHSKLQFP
QMSIHSFHELLFAIRLLICNEKCEGKFVLSCQLLKPPMMALQQALVSRTNSGPGGDNTKG
QLQTLLTRAGYGAPFYTTTQLKNNQFRATVEFNGVQIMGQTYSNKKNAEKDAAAEALQWL
MGRIQTGNEDINDMTMLLKKRKTDHN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcgcattccgtttctcgccatggattcttctcttcccgttcatgttgacgat
gctgacaaagggtttaattgcgatgctgacaaagggtttaattgcgatgctgacaaaggg
aattcttcgagtgatttccccagcgaggactggaagcagaaattaaacatgcttttgaat
gatcagagtaagcaagagttggtctcaagggagaaaaaggatcggcgtgattttcagcaa
atacagactttggcgagcaaaatggggttgtatagccatatgtatgcgaaggtggttgtt
gtcagcaaagcccctcttccaaactacagatatgatttggacgataaacgccgccttagg
gaggtgaacctacctactactttgttaaggcaagttgatggatatcttcaagaataccta
acccagaagtcaagaaggaaggaaagcttttccgatttgtggtgtgcaacaccagccgac
agcggtggtacacatgaagggctttttgagccacctcagtcactatcatgcagcagggct
gtagtggataaatttctttgtcagagaagttcacaaatgcgtgatcagcaaagaacttgg
caggaatctccagatggaagtaagactctggaatttcgtagcagtctacctgcttataaa
gagaaggaagcaatattatcagccatatcaaggaatcaggtacttatcatctcgggtgaa
acaggttgtggaaagacaacacaagttccacaatttatcctagaatcggagatagaatta
gttcgtggagctgtgtgtaatatcatttgcacacaaccaagacgcattgcagcaatttct
gtttctgaaagagttgcctctgaaagaggagagaaattgggtgaaactgttggatataaa
gttagacttgaaggcatgcaagggagagatacccatcttctcttctgcaccacaggcatc
ttattaagaagattactagatgataaaaaattaaaaggcataactcatattattgttgat
gaaattcatgagcggggaattaatgaagattttttgcttgttgtccttaaagatcttcta
gctttcaggccagaactgaaactgattttaatgagtgctacccttgatgctgagctcttc
tcttcatattttaataatgcttcaactatgaagattccgggtttgacatatcctgtcaga
actcattttttggaggatattttggaaatgtcgggctacaaattgactcctgacaatcaa
attgatgactatggtccagaaaggatttggaaaatgaacaaacagttgccaggaaagagg
aaaagccaattatcttctgctgtggaggatgtgttaaaagctgctgatttcaattattac
agtccgcaaacaagagagtctttgtcttgttggaatcctgactttattggttttaacctc
atacaatatatactgtgcaatatatgtgagcatgaaagaccaggtgccattttagttttc
atgattggatgggatgatataaatgctctgaaggagaagctcctaacacatcctgtcttg
agtgatccaaaccgagttttgttggtgatgtgccatggctcaatggacagtttggagcag
aggttaatctttcaagaacctgaagatggagtacggaaaatagtgctagcaacaaatatt
gctgaaacgagtatcacaatcaatgatattgtttttgttatcgactgtgggaaggcaaaa
gaatcatcatatgatgcattgaataacacatcttgtttgcttcctacttggatttctaag
gtttcagttcaacaaagaagaggaagagctggtcgtgttcaaccaggagaatgttatcat
ctctatcctagatgtgtatatgattctttcacagagcatcaattacctgaaattttgagg
atgccgttgcaatctctctgtttgcaaatcaaaagtttgaaactaggaagtatatctgag
tttttgtctagggctttacagtctccagagatacttgcggtgcaaaatgcaattgaatat
ttgaaaacaattggagctctggatgagagtgagaatctgactattttagggcgccacctg
gcagtgcttcctatggaacccaaacttggcaagatgctgatatttggtgtcatattcaat
tgtctggatcctatactaacaattgttgcaggccttactgttcgatgtccttttctaaca
ccttcagataaaaaagatcttgcacaggcagcaaagtctcagttttcccatgattacagt
gaccatcttgccattgtgagggcctatgatagctggaaggatgccgaaatagacaatgct
ggacatgaatactgctggaagaattttctttctccacaatccatgaaagttattgaggct
cttcgagtggaattcttatccctgctcaaagatattggattagttgatagaaacatgagc
agttgcaatgcatggagctatgatatgtatctcattcgagcagctatttgctatggccta
tatcctggaatctgctcggttgtgcataaggataagtcattttctctgaaaacaacggat
gatggcaaagtgttcctacattcgaattcagtgaatgctcgcgaatctagaattccatat
ccatggctagtttttaatgagaagataaaagtgaactctgtatttctccgtgactcaaca
gctgtgcctgattctgtggtacttctttttggtgggagaatctcaaaaggagatactgat
ggtcacttgaaaatgtcgggaggatatttggagttttttgtgaaacctgctgttgctgac
atgtaccagagtataaggaaagatcttgacagactcattcacagtaaattacagttcccg
cagatgagcatacactcattccatgagctcttatttgctatacggttgttgatttgtaat
gagaaatgtgaaggcaaatttgtattgagttgccagctccttaaaccaccaatgatggca
ttgcaacaagcattggtttcaagaacaaacagtggacccgggggtgataatactaaagga
cagcttcaaacattgctgacccgagctggatatggtgcacccttctacacaactacacag
ttgaagaataatcagtttcgtgctacagttgagtttaatggagtgcagattatgggccaa
acatatagcaacaaaaagaatgcagaaaaggatgctgcggctgaggcactgcagtggctt
atgggtagaatacaaaccgggaatgaggatatcaatgacatgacaatgttgctgaagaaa
aggaagacagatcataattga
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integrated database retrieval system
