Vigna radiata (mung bean): 106778052
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Entry
106778052 CDS
T04126
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E
KO
K07466
replication factor A1
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03030
DNA replication
vra03420
Nucleotide excision repair
vra03430
Mismatch repair
vra03440
Homologous recombination
vra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106778052
03420 Nucleotide excision repair
106778052
03430 Mismatch repair
106778052
03440 Homologous recombination
106778052
03460 Fanconi anemia pathway
106778052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vra03000
]
106778052
03032 DNA replication proteins [BR:
vra03032
]
106778052
03400 DNA repair and recombination proteins [BR:
vra03400
]
106778052
Transcription factors [BR:
vra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106778052
DNA replication proteins [BR:
vra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106778052
DNA repair and recombination proteins [BR:
vra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106778052
MMR (mismatch excision repair)
106778052
DSBR (double strand breaks repair)
HR (homologous recombination)
106778052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
DUF223
zf-CCHC_2
BRCA-2_OB1
NGO_1070-like
Motif
Other DBs
NCBI-GeneID:
106778052
NCBI-ProteinID:
XP_014521425
UniProt:
A0A1S3VSZ5
LinkDB
All DBs
Position
11:complement(8218506..8222152)
Genome browser
AA seq
869 aa
AA seq
DB search
MAGSLTPGAIKEICGANCSSSLKPVLQVIDLKLVQSQQANNTERYRLILSDGSFYQQGML
ATQMNELVHSGKLQKGSVVRLTQFICNDVQNRKIIVIIDLDVVVEKCELIGEPVSLPKDG
SVESGTGQSGVTPGNSQSLNNRSHSGGMAARPNVGGMAARPNMAIPSPDLPRMNAPASSA
YSGISNTGSSYSSDAPPTYPKVESGANFSRSAPFTGSHGDQNMGIRHPQSETSRPLPNSY
ARAPQPMYRQPSPMYTNRGPIGKNEAAPRIIPIAALNPYQNMWTIKARVTAKGELRHYNN
ARGDGKVFSFDLLDSDGGQIRATCFNSVADQFYNLIEAGKIYLVSRGSVKPAQKNFNRLP
NDQELTLDMTSIIQPCPDDDNSIPKQTFNFRPISEIESLESNTIVDVIGVVTSISPTASI
MRKNGTETQKRTLQLKDMSGRSVELTLWGNFCNVEGQRLQTICDDGKFPVLATKAVRIND
FNGKSVGTIMTSLLFIEPDFPEAYSLKRWFEKEGKNVPTLSISKDTSSFPKNDNRKTVSQ
IKDEKLGTSEKPDWISVCATISFMKYDNFCYPGCPIMIGDRQCNKKVTNNGDGKWICDRC
NQSVDACDYRYILSFQIMDHTGVTWVTAFQESGEEIIGLPAKDLYYLKYEEQNDERFAEI
IRKVLFSEYVFKLKVKEETFSDEQRVKATVVKAEKVNFASKSRVSLELIDKLLTGKSEGA
TTVTNSLSGNTGLGSVETGQVMPPAYNPIKSSTNSSRDFGMPANQVGQQYGNQYGNFASA
GAPGAYTSCTNCGGSGHTSILCPNVRNPAGQSSGGGFSNRVSYGGSGGGASGECFKCHQP
GHWARDCPGSSAATASYGSNTMQGRYGGY
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtcactgacgccaggggcgataaaagaaatatgcggtgccaattgttccagt
agtttgaaaccagtgttgcaagttatagatttgaagctggtgcagtcgcaacaagccaac
aacaccgagaggtaccggttgattctttctgacggttccttttaccagcaaggcatgctc
gccacgcagatgaacgaactagttcattctggaaagttgcagaaaggttccgtcgttagg
ctcacgcagttcatctgcaacgatgtccagaaccgcaagattattgtcataattgaccta
gatgtagtagtggaaaaatgtgaattgattggagaacctgtctccttaccaaaagatgga
tctgtagaatctggtactggtcaatcaggagtcacccctgggaattcacaatctttgaat
aaccgttcacactcaggaggcatggctgctagaccgaatgtaggtggcatggctgctaga
ccgaatatggccataccatctccagatcttccaagaatgaatgctcctgccagtagtgct
tattctggcatttccaacactggatctagttattctagtgatgcacctcctacatatcct
aaagtagaatccggagctaatttttctagatcagcaccatttactggatctcatggtgat
cagaacatgggtattcgtcatccccaatctgagacttcaaggcccttgccaaactcttat
gctcgtgcacctcagcctatgtatcggcaaccatctccaatgtacactaacagagggcca
attggaaaaaatgaagctgcccccaggataattccaatagcagcattgaatccttaccag
aatatgtggacgattaaagccagggtaacagctaagggagaactcaggcactataacaat
gctcgaggtgatggcaaggtgttttcatttgaccttttggattctgatggtgggcaaatt
cgggcaacttgcttcaatagtgtggctgatcagttctataatttgattgaagctggtaag
atatacctagtttccaggggaagcgtaaagccagctcagaagaatttcaatcgccttccc
aatgatcaagagttaacccttgatatgacatccatcatacaaccatgccccgatgatgat
aactcaattccaaagcagacttttaattttcggcccattagtgaaattgaaagtttggaa
agcaacaccattgtggatgtgattggtgtggtgacttcaattagtcctacagcttcaatc
atgagaaaaaatggtactgaaactcagaagagaacactccagttgaaagacatgtctggt
cgaagtgtcgagttaactttgtggggaaatttttgcaacgtggaaggacaaaggctgcaa
actatttgtgatgatgggaaatttccagttttggctacaaaagctgtcagaattaacgat
ttcaatggaaagtctgttgggactataatgactagcctactgttcatagagcctgatttt
ccagaggcttactcactgaaaagatggtttgaaaaggaagggaagaatgtcccaactctc
tctatctctaaagatacatctagttttcctaagaatgataatcggaagactgtatctcaa
attaaagacgagaagttagggacttcggagaagcctgattggatatctgtctgtgcaact
atttcattcatgaagtatgataacttctgttacccaggatgtcctatcatgataggggat
aggcaatgtaacaaaaaagtgactaataatggtgatggaaaatggatttgtgataggtgt
aaccaatctgttgacgcttgtgattataggtacatactgtcattccagataatggatcac
acaggtgtaacatgggttactgctttccaggagagtggtgaggagataattggcctgcct
gcaaaagatttgtattatctgaagtatgaagagcaaaatgatgaaagatttgctgaaatc
atccggaaggttctcttctccgagtatgtgttcaagttgaaagtaaaagaggaaacattc
agtgatgaacaacgtgttaaggcaactgtggttaaagcagaaaaggtaaactttgcatct
aaatccagagttagtttggaattgattgataaactcttgactgggaaatcagaaggtgct
accaccgttaccaactcattatccggtaatactggactggggagtgttgaaactggtcaa
gtaatgccaccggcttataacccaataaagagtagcactaatagcagtagagattttggg
atgccagcaaatcaagtgggtcaacaatatggaaatcaatatggcaattttgcttcagca
ggtgctcctggtgcatatacatcatgcaccaactgtggaggttctggtcatacttctata
ctttgcccaaatgttagaaatccggctggacagtcttcaggagggggcttttccaacagg
gtatcatatggtggatctggtggtggtgcttctggtgaatgctttaaatgccatcaacct
ggccactgggcaagagactgtcctggttccagtgcagcaactgcatcatatggaagcaat
acaatgcagggaagatatggaggatattga
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