Vigna radiata (mung bean): 106778851
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Entry
106778851 CDS
T04126
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106778851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106778851
03019 Messenger RNA biogenesis [BR:
vra03019
]
106778851
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106778851
RNA polymerase I system
106778851
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106778851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW6_SPT51-2
Spt5-NGN
KOW2_Spt5
KOW4_SPT5
KOW
KOW7_SPT5
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF4438
Motif
Other DBs
NCBI-GeneID:
106778851
NCBI-ProteinID:
XP_014522333
UniProt:
A0A1S3VVC7
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MSHRGMDRDDDDDDYMEDEQVADFDEEDDRRGRGGGSRKRRRSGFIDDDAEEVDEDDEEE
DDDDEDFDARGGRRRQYKKVSASNFFDEEAVVDSDEEEEEEEGEDDFIVEGGADLPEEDD
GRRMRNRRMLPHHQEDHEDLEAVARSIQERYGRRLTDYDEETTDVEQQALLPSVRDPKLW
MVKCAIGRERETAVCLMQKYIDRGSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLR
NIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTV
KLIPRIDLQALANKLEGREVVKKKAFVPPPRFMNVDEARELHIRVEHRRDPYGERFDAIG
GMMFKDGFLYKTVSIKSISAQNIKPTFDELEKFRKPGESGDGDVSSLSTLFANRKKGHFM
KGDAIIVIKGDLKNLKGKVEKVDEDNVHIRPEMEGLPKTIAINEKELCKYFEPGNHVKVV
SGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVVESSEVTTGVTRIGDYELRDLVL
LDNMSFGVIIRVESEAFQVLKGIPDRHEVVLVKLREIKCKIDKKISVQDRYKNTVSSKDV
VRIVDGSSKGKQGPVEHIYRGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGDRNGDA
YSRFPTLRSPSRIPPSPRRFPRGGPMDSGGRHRGGRGRGHDGLAGTTVKVRQGPYKGYRG
RVIDDKGTSVRVELESQMKVVTVDRNHISDNVAITPYRDTSRYGMGSETPMHPSRTPLHP
YMTPMRDPGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGASPQYQPGSPPS
RPYEAPTPGAGWASTPGGNYSEAGTPRDSSAYANAPSPYLPSTPGGQPMTPSSASYLPGT
PGGQPMTPGTGGMDMMSPVLGGDNEGPWFIPDILVNVHRAGDESVGVIREVLPDGSYKVA
LGSSGNGETITALPNEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDV
KILDLVILAKLAQP
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccggggaatggaccgcgacgacgacgatgacgattacatggaagacgagcag
gtcgcagacttcgacgaggaggatgaccgccgggggcgtggtggcggcagcaggaagcgc
agaagatctggtttcattgacgatgacgctgaggaggtagatgaggatgatgaggaggag
gatgatgatgatgaggatttcgatgcccgaggcggtcgcaggcgccagtacaaaaaggtt
tccgcttctaatttttttgatgaggaggccgtggtggatagcgatgaggaagaggaagag
gaagagggcgaagacgacttcattgttgagggtggagccgatctaccagaagaagatgat
gggagaaggatgcggaataggcgaatgctgccacatcaccaagaagatcatgaagatctt
gaagctgtggccagaagcatccaggaacgttatggaaggcgcctaacggattatgatgaa
gaaacgacagatgtagaacaacaagctcttttgccgtctgtgagagatccaaagctttgg
atggtcaaatgtgcaattggtcgcgaaagagaaacagccgtttgcctcatgcaaaagtac
atagatagaggatctgaattgcaaataagatcagctattgctcttgatcatctcaaaaac
tatatatacgtggaagcagataaagaagcccatgtcagagaggcttgcaaaggtctacgc
aatatatttggccaaaaaataactcttgtcccaatcagagaaatgactgatgttctgtca
gttgaaagcaaagcaattgatcttgctagagatacttgggttagaatgaagatcgggaca
tataaaggggaccttgccaaagtagtggatgttgataatgtgaggcagagggttactgtc
aaattaattccaaggatagacctgcaggctcttgcaaataaattggaaggtagggaggtt
gtgaaaaagaaggcttttgttcctccccctcgatttatgaatgttgatgaagcaagggaa
cttcatatccgtgtggagcatagacgtgacccatatggtgaacgttttgatgcaattggg
ggcatgatgttcaaagatggtttcctatacaaaactgtttcaataaaatccataagtgct
cagaacatcaaacctacttttgatgagttggaaaaattccggaaaccgggtgagagtgga
gatggtgacgtgtctagtctttcaactttgtttgcaaacagaaagaaagggcactttatg
aaaggtgatgccatcattgtcattaagggtgatttaaaaaatctcaaggggaaggtggag
aaggtagatgaagataatgttcatataagaccagaaatggagggcctcccaaaaactatc
gctataaatgaaaaagagctttgtaaatattttgaaccgggaaaccacgttaaagttgtt
tctggcgctcaagaaggtgctacgggcatggttgtgaaggtcgagcagcatgttttgatt
ttaatatctgatacaacaaaagagcatattcgtgtctttgcggatgatgttgtagaaagt
tcagaagtaacgactggagttactagaattggggactatgaactccgtgatcttgtattg
cttgataatatgagctttggtgtcataatacgtgtagaaagcgaagcatttcaggttcta
aaggggattcctgacagacacgaagttgtgctggttaaattaagagagatcaaatgtaag
atagataagaaaataagtgtgcaagataggtataagaatacagtttcatcaaaggatgtt
gtccggattgttgatggttccagtaaagggaaacaaggtcctgtggaacacatatataga
ggaatcttgttcatctttgatcgccatcatcttgaacatgcaggctttatatgtgctaag
gcccaatcatgtgtggtagtggggggttcacgctccagtggtgacagaaatggtgatgcc
tactcaagatttcccacacttagaagcccaagtcgtattccaccatccccaaggaggttt
cctcgtggagggccaatggattctggagggagacataggggtgggcgtgggcgcgggcat
gacggtttggcaggtacaactgttaaagtgcgtcagggtccatataaaggttatcgtggg
cgtgttatagatgataaaggcacatcagttcgtgttgagcttgaatctcaaatgaaggtt
gtaacagttgaccgcaaccatatatctgacaatgtggctataactccatatcgtgataca
tctcgctatggaatgggaagtgaaaccccaatgcacccttctcggactcccctacaccca
tatatgactccaatgagagatcctggagcaacacctattcatgatggaatgaggacgcct
atgcgtgaccgagcatggaatccatatactccaatgagtcctccaagggacaactgggaa
gatggaaatccaggctcttggggagcaagtccacagtatcagcctggaagccctccatca
cgaccatatgaagccccgactcctggtgctggttgggctagcacacccggtggaaattat
agtgaagctggaacgcctcgggacagttctgcctatgctaatgctccaagcccgtattta
ccatcaacacctggtgggcagcctatgacaccaagttcagcatcttatcttccgggcacg
cctggaggacagcctatgactccaggcacaggtggtatggacatgatgtctccagtttta
ggtggggacaatgaaggcccatggtttataccagatatattagtcaatgtacacagggcc
ggagacgaatctgttggagttataagagaggttcttccggatggctcgtacaaggtagct
cttggatctagtggtaatggtgaaacgattaccgcccttccgaatgaaatggaggctgtg
gtaccaagaaaatcagacaaaataaagattatgggtggggcattgcgtggtgccactggc
aagttgattggtgtagatggtactgatggaattgtaaaggtagatgacacgttggatgtc
aagattttagacttggttattttggcaaaattagctcaaccatga
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integrated database retrieval system
