Vigna radiata (mung bean): 106779415
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Entry
106779415 CDS
T04126
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106779415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106779415
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106779415
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106779415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
106779415
NCBI-ProteinID:
XP_014522998
UniProt:
A0A1S3VXA3
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Position
Unknown
AA seq
891 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKNKPPRLIHLETSITRHKA
HVKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEEFSDVDELYSSLPLDKVES
LEDIVTIPPGLAKVAPVLSLKPLPTSASASQTSEQADDTASQDSNSDVGARTPPPKSSTV
SSTATTPVANFATPVSINVMVPNLSSPPPISSVTPGSNSLRSSLEVSSAVNASFVNQSST
VKEDDINSFPVRRPSPSLSDVALIRNIGRNSLSNQITNNIPVVSGNMVSSNGPLGSVSST
SEITKRNILVADDRLGSNGMVPTLVSPLSNRMIIPQVARGTDGTSSVDSSNANEGATLSG
RVFSPSAIPGMQWRPGSPFQNQNDVGHVRARTEIVPDQRERYLQKFQQVQQGQSALLNMP
SYTGGNHKQFSAQQQNPLLQQFNSQGSSVASQSGVGLGVQSSGLSGISSTSLPQPPISVN
SPSSQQSLLSVVSKDPDVGNSKVDESQQQIFPDDSGTDSTASTGISKNFMNEDELKSTYA
IDSPAGVPGSLTEPVQTSRGIDLSPGQPLQSNQRTGNLGVIGRNSTDLGLVGDNFSAFSA
NSGGVRDQLYNLQMLEAAHLKLPQPKDSERLRTYTPFPFFLVMQKHPTITPPSFPQVQAP
IVNNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHE
EPKVATDEYEQGTYVYFDFHIANDDMQHGWCQRIKTDFTFEYNYLEDEPIV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagtcggaaactccagggcgagattgatcgtgttctgaagaaggttcaggaa
ggcgtcgaagtctttgatagcatctggaacaaggtttacgacacggacaatgcgaaccag
aaggagaagttcgaggctgacctgaagaaggagattaagaagctgcagaggtacagggac
cagattaagacttggattcaatccagtgaaatcaaagataagaaggtaagtgcctcgtat
gagcaggctttggtggatgcacgcaagcttattgagcgtgaaatggaaagattcaagata
tgtgagaaggagacaaagacaaaagcattctctaaagaaggcttaggtcaacaacctaaa
actgatcctagagagaaggctaaatcggagacaagggattggttgaacaatgtggttggg
gaattagagtctcagatcgataactttgaagctgagcttgaaggactttctgtaaagaaa
ggaaagaacaagccacccagattgatacatctagaaacatcaatcactcggcacaaggct
catgtaaagaaatgtgaatttatcttgaggctacttgataatgatgaactaagtccagag
caggtgaatgatgtcaaagatttcttggatgactatgtagagcgtaatcaggaggacttt
gaagaatttagtgatgttgatgagctatatagttcattacccctagataaggtggagtca
cttgaagatattgtaacaattccccctggtcttgctaaggtggcacctgttcttagcttg
aagcctctgccaacatcagcttcagcatcacaaacatctgagcaagctgatgatacagct
tctcaggatagcaattctgatgttggtgcaagaactccacctcctaaaagtagtacagtt
agttctactgcaacaacaccagtggcgaattttgctactcctgtttctataaatgttatg
gtgcctaacttgtcaagtccaccgcccatttcatctgtcacacctggttcaaattctctt
cggagttccttggaagttagtagtgctgtcaatgcttcatttgtaaatcagtctagcact
gtgaaagaggatgatattaatagtttccctgtccgaagaccatctccatcactttctgat
gttgcactcataaggaatatcggcagaaacagcctgtcaaatcaaataacaaataacata
cctgttgtatctgggaacatggtttccagcaatgggccccttggttcagtttcttcaact
tctgaaataaccaagagaaacatattggttgctgatgatagactcggaagcaatgggatg
gtgccaactctcgtatcccctttaagtaatagaatgattattcctcaggttgcaaggggt
actgatggaacatcctcagttgactctagtaatgccaatgaaggtgcaactttgtctggg
agagttttctccccttctgctattcctggcatgcagtggagacctggaagccccttccag
aatcaaaatgacgtgggtcatgttcgtgcaagaacagaaatagttcctgatcagagggaa
agatatttacagaagttccagcaagtgcaacaagggcaaagtgcccttcttaatatgcca
tcttatactggaggaaatcacaagcagttttctgctcaacaacaaaatcctctcttacag
cagttcaattctcaaggctcatctgttgcttctcaatctggtgtgggacttggagtccag
tcttcaggtcttagtggtatttcttccacctcattaccacagccacccatttctgtaaat
tccccatctagccaacaatcactgctgtcagttgtttctaaagatccagatgttggcaat
tctaaggttgacgagtcacagcaacagatttttcctgatgattcggggactgactctact
gccagtactggaattagcaagaattttatgaacgaagatgaactgaaatccacatatgct
atagactctccggcaggagtacctggatctcttacagagcctgttcagacttctaggggt
attgatttgtctcccggccaacctttacaatcaaatcagcgtactggtaaccttggtgtt
ataggaagaaattctactgaccttggacttgttggtgacaactttagtgcattctctgca
aattctggaggagttcgtgatcagttatataatttacagatgcttgaggcagctcacctc
aaacttccgcaacctaaggactcagaacgtctcaggacctacactccttttccatttttt
ctggttatgcagaaacatcctacgataactcctcctagttttcctcaagttcaggcacca
attgttaataatccagccttttgggagagagtgggtctagaaccatacggtaccgatacc
ctgttctttgcattttactatcaacagaatacttaccaacaatatatggctgcaaaagag
ctaaagaaacagtcttggagatatcaccgcaagtataacacatggtttcaaaggcacgaa
gagccaaaagttgcaacagatgaatatgagcaaggaacatatgtgtactttgatttccat
atagcaaatgatgacatgcaacatgggtggtgtcaaagaatcaagactgacttcactttc
gaatataattacctagaagatgagcctattgtctag
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