Vigna radiata (mung bean): 106780281
Help
Entry
106780281 CDS
T04126
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
KO
K14962
COMPASS component SWD2
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106780281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106780281
03036 Chromosome and associated proteins [BR:
vra03036
]
106780281
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106780281
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
106780281
COMPASS/SET1 complex (yeast)
106780281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
PAC11
Beta-prop_VPS8
TRM82_WD
PD40
Tricorn_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
106780281
NCBI-ProteinID:
XP_014524038
UniProt:
A0A1S3W049
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MTSSLTELDDDLVRCMSIGAVFSEFGGKIHSIDFHRKDDLLVTASEDDSVRLYDIANAKL
LKTTSHKKHGTDRICFTHHPSSVICSSKYNLESTGESLRYLSMYDNRCIRYFKGHTQRVV
SLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPAVAYDQQGLVFAVAMEGGAI
KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYILDAYGGEKRCGF
SLEASPGTPIEATFTPDGKYMVAGSGGGTMHAWSIETKNEVASWSSCIGVPSCLKWAPRR
AMFAAASSVLTFWIPNNDSKLKTDNGGNDAEAGSQPQTLLH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtcgcttacggagcttgacgatgatttggttcgctgcatgtccataggagcc
gtcttctccgaattcggtgggaagatacattccatcgatttccatcgaaaggatgattta
cttgtcacggcaagtgaggatgactcagttcgactttatgacatcgctaatgccaagttg
ctgaagaccacttctcataagaaacatggtacagataggatatgctttactcatcatcca
agctctgttatatgctcttcaaaatacaatttggagtctactggagaatcattgcgatac
ttatcaatgtatgataaccgatgcataagatacttcaaagggcacacacagagggttgtt
tctctctgcatgtctccaatcaacgatagcttcatgtctggttctctagaccacagtgtc
aggatatgggatcttcgagtaaatgcttgccagggcatcttacgtctacgtggtagacct
gctgttgcatatgaccaacaaggccttgtctttgctgtagcaatggaagggggggctatt
aaattattcgattctcgttcttatgacaagggtccatttgacacctttctagttggtggt
gacacagctgaagtttgtgatatcaaattcagtaatgatggcaaatcaatgcttttaact
actactaataacaatatttatattcttgatgcatatggaggagaaaagcgttgtgggttt
agtttggaagcatctcctggtactcctatagaggctacttttaccccagatgggaaatac
atggtggcaggctcaggaggtggaaccatgcatgcttggagtattgagacgaagaatgag
gtggcaagttggagcagctgtattggcgtgccttcgtgcttgaaatgggcacctcgcaga
gccatgttcgctgcagcttcaagtgttcttacgttttggatacctaataatgattcaaag
ttgaaaactgataatggtggtaatgacgctgaagctggatctcaaccgcaaacgcttctc
cattga
DBGET
integrated database retrieval system
