Vigna radiata (mung bean): 106780408
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Entry
106780408 CDS
T04126
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106780408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106780408
03019 Messenger RNA biogenesis [BR:
vra03019
]
106780408
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106780408
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106780408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
Pcf11_C
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
106780408
NCBI-ProteinID:
XP_014524182
UniProt:
A0A1S3W124
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MFSQNLILPPENPRPAASFASKPMSNEIAIAAQKPPPSILVGRFKALLKQRDDELRLVAG
VPVPPPTTDEIVQIYDLLLSELTCNLKPIITDLTIIAEQQREHAKGIADAICARILEVPA
DQKLPSLYLLDSIVKNFGQEYIKYFSLRLPEVFCEAYRQVQPSLHPAMRHLFGTWSKVFP
PSVLRKIEAELQFSVAVNTQSSTLNAVRASESPRPSHGIHVNPKYLRQLDPSTVDSVGAE
KLDSSGNANNTNFGILGSKTHQILSGSGRLGISSSPSRSGLDRPLSAPMDEYAADSSANR
LIERDSSHPAVDYGVGKAIGRDMELSEWQRKQYAGDGRNRFPTSITYSLSNGHQRQSPRA
LIDAYGSDKSQETSSTKPLLVERLDRNGIDNKVLPTSWQNTEEEEFDWEDMSPTLTDHSR
NNSILPSTIGFTRERPVVAANAALSEHDSRKGVWSSGSQLPPVDDSSAIAEDAFSSLGFR
RQSLGQIPGFQNHINHSLGSSHHLSNSSQHIFGNRGRARTLTFPPIDNIHNADTNPYRVR
PTVSRMVSGRVSNVEPRPSVLPATLEIRPSVNLNVTRPPALNPITPLQKHVRSQFEALHT
SNPIVNHVNKSSFMPEQSFDSVENKDASILKIHQLPNQLPGLISSNQQNHRQAPQLQFFP
PSQDSSNSQFSHGSSLQGHGASISTAMSNPLPIMQFHLPLQNVANNPLHLQGGARPPLPP
GRPPAPPQMIPLPNASPFMSSQQPTVGYTNLISSLMSQGVISLANQLPAQDSVGTEFNPD
ILKLRYESAINALYGDLPRQCTTCGLRFRCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWF
VSDRMWLSGAEALGTESVPGFLPTETIEEKIDDEELAVPAEEDQNTCALCGEPFDEFYSD
EMEEWMYRGAVYLYAPTGTTAGMDRSQLGPIIHAKCRSESNMAPSEDLGPDEKGGDEEGT
QRKRRRS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccaaaatctgattctccctcccgaaaaccctagaccagcggcctcgttcgct
tcaaaacccatgagcaatgagatcgcaatcgctgcgcagaaacctcctccgtcgattctc
gttggccgtttcaaggcactcctcaagcagcgtgatgacgaactcagactcgtcgcaggc
gtccccgttccgcccccgacaacagatgaaatcgtccagatttacgacctccttttgtcg
gaactcacctgtaatttgaagcctatcatcaccgatctcacaatcatcgccgaacagcag
agggagcacgccaaaggcatcgctgatgcaatttgcgctcggattctcgaggtgccagca
gatcaaaagctcccctcactctatttgttggacagtattgtgaagaattttgggcaggaa
tacattaaatacttctctttacgtctgccagaagttttttgtgaggcatacaggcaggtt
cagcctagtttgcatcctgctatgcggcatctttttgggacatggtcaaaagtttttccc
ccttctgtcctacgcaagattgaagctgaattgcaattttccgtagcagttaatacccaa
tcatccaccctgaatgccgtaagggcttctgaatctccgcggcctagtcatggcatacat
gttaatccaaaatacctgcgccaattggatccctcaaccgtggatagtgttggtgctgaa
aagttggattcatcaggaaatgccaataatacaaactttggcattctaggtagtaagaca
caccaaattttatcaggcagtggcaggctgggaatatcctcttccccttcaagaagtgga
cttgataggcctttgtctgcacccatggatgagtatgcagctgacagttctgctaacaga
ttaattgagagagactcttctcatcctgctgttgattatggagtaggcaaggcaataggt
agagatatggagttgagtgaatggcaacgaaagcagtatgctggtgatggtcgtaatagg
tttccaacttctatcacatacagccttagtaatggacatcagcgtcaaagtcccagagct
ttaatcgatgcatatggcagtgacaaaagtcaagaaacttcaagtactaagcctttgcta
gtagaacggcttgatagaaatggtatagacaacaaggtattgcctacatcatggcagaat
actgaagaagaggaatttgattgggaagatatgagtccaaccttaactgatcatagtaga
aataacagtatattgccttcaactattggattcaccagggaaaggcctgttgttgcagct
aatgccgctttgtcagagcatgattccaggaagggggtttggtctagtggatctcagctt
cctccagtggatgattcttctgctatagcagaagatgcattttcttctttgggttttcga
cgacaatccctgggacagatacctggattccaaaatcatatcaatcatagtctgggttct
tctcatcatctgtccaactcgtcacaacatatctttggtaataggggcagggcaagaact
cttacatttcctcctattgataacattcacaatgccgatacaaatccatatcgggttcga
cctacagtatcaaggatggtttctggccgtgtctctaatgtggaacctagaccatcagtt
ttgcctgcaactcttgaaataaggccttctgtaaatttgaatgtcactcgaccacctgca
ttaaatccaataactccattacaaaaacatgttaggagtcagtttgaagctttacatact
agtaaccctattgtgaatcatgtaaataaatcttcatttatgccagagcagtcatttgac
agtgttgagaacaaggatgcaagtattttgaagatacatcagttgcctaatcagcttcct
ggactaatttcgtccaaccagcaaaatcacaggcaagcaccacaactgcagtttttccca
ccatctcaggattcgtcaaactcacaatttagtcatgggagttctttgcagggacatggt
gcttctataagtactgccatgtcgaatccattacctattatgcaattccatttgccactg
caaaatgttgcaaataaccctttacatttacagggtggagcccgtccacctttacctcca
ggtcgccctcctgccccaccacaaatgatacctcttccaaatgccagtccatttatgtca
agccaacagccaactgttggatatactaatttaattagttctctaatgtctcaaggtgtg
atctcattggccaaccagctgcctgcacaggattctgttggaactgagttcaatccagat
attctgaagcttcgttatgagtctgctatcaatgccttgtatggtgatctcccaagacaa
tgcacaacttgtggactccgattcagatgccaagaggaacacagtagtcatatggattgg
catgtgacaaagaatcggatgtctaaaagccggaagcagaaaccctctcggaagtggttt
gtgagtgacaggatgtggcttagtggtgcagaggcattgggaaccgagtcagttccaggt
tttttgcctacggaaaccatagaagaaaagatagatgatgaagagttggctgttccagca
gaagaggatcaaaatacttgtgcattatgtggagagcctttcgatgagttttacagtgat
gaaatggaggaatggatgtataggggagctgtatacctctatgctcccacggggacaaca
gcaggcatggacaggtcacagttaggccccataattcatgctaagtgcagatcagaatct
aatatggcaccatctgaagatcttgggccggatgaaaagggtggtgatgaagagggtacc
caaaggaagcgaaggcgtagttga
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integrated database retrieval system
