Vigna radiata (mung bean): 106780498
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Entry
106780498 CDS
T04126
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106780498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106780498
03012 Translation factors [BR:
vra03012
]
106780498
Enzymes [BR:
vra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106780498
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106780498
Translation factors [BR:
vra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106780498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_16
Post_transc_reg
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106780498
NCBI-ProteinID:
XP_014524279
UniProt:
A0A1S3W1X1
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MRSSKFAVSLLIARAKSLQLHHLTCHCVASSSPTSTPLFRFSPSSIRNANSVATTRLFSS
YYSLEQFSDDEYDGDFENQQVSSTVANVDEWKWKLSMLLRSEKDQEIVSRDKKDRRDYEQ
IANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYL
DRLQLDSAKTSASLDDGNSTNQVKEIDINENDDSFVDESVMEKVLQKRSLRMRNMQRAWQ
ESPEGRKMLEFRKSLPSFMEKQGLLQAIAHNQVIVISGETGCGKTTQIPQYVLESQIESG
RGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGIL
LRRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFS
NYFGGAPTFRIPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLAPRKR
KNQITSLVEDALSKSSFENYSSRARDSVASWAPDCIGFNLIEAVLCHICRKERPGAVLVF
MTGWEDISSLRDQLKAHPLLGDPNRILLLTCHGSMATSEQKLIFEKPPPNIRKVILATNM
AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYH
LYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSAALQAPEPRAVQNAIDF
LKMIGALDEKENLTNLGSFLSILPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFLL
PQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSSYEYCWRNFLSAQTLQAIH
SLRKQFSFILKDAGLVDADASMINKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTI
DDGQVLLYANSVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGIQ
AGHLKMLDGYVDFFMDPNLADCYLKLKEALNKLIQKKLEDPSIDIHKEGKYLMLAVQELV
SGDQCEGRFVFGRESRKPRASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTN
EFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNNQPEDDNSPPDVTDNMLK
LLGKRRKSKRRHD
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagttcaaagtttgcagtgtctctgcttatagcacgtgccaagtcccttcaactt
caccacctcacgtgtcactgcgtcgcttcttcttctccaacctcaacgccactcttcagg
ttttccccttcttccatacgaaatgcgaattccgtcgccaccactcgcctcttctccagc
tactattccctcgaacagttttccgatgatgaatacgacggtgactttgagaaccagcag
gtatcgtctacggtggccaatgtagacgagtggaaatggaaactcagcatgctgttacgc
agcgaaaaggaccaggaaattgtatcaagagataaaaaagataggagggactatgaacag
atagctaaccttgccaaaagaatggggctatacagtgagttgtttggaaaagtggtcgtt
gcaagcaaggtgcctcttcccaactaccgtccagatttggatgacaaacgtccacaaaga
gaggtggtgattccactaagcttgcaaaggagggttgagggtttgctgcaggagtacctt
gatagacttcagttagattctgcaaagacaagtgccagcctggatgatgggaactccacc
aatcaagttaaagaaatagacattaacgaaaatgatgattcttttgtggatgaatctgtc
atggaaaaggttctccaaaagaggagtttgaggatgcgcaatatgcaaagagcttggcag
gaatcacctgaaggcaggaagatgttggagttccggaagtctctaccatcatttatggaa
aagcaaggtttacttcaagctatagcacacaatcaggtgatagttatatctggagagact
ggctgtggtaaaaccactcaaattcctcaatatgtattagaatcacagatagagtctggc
cgtggagcattttgtaacattatttgcacccagcctcgaagaatatcagccatggcagtt
tctgagagagtgtcagccgagcgtggagagcctcttggtgaaacagtgggcttcaaagtt
cgattagaaggaatgaaagggaaaaacacccatcttctattttgcaccagtggtatatta
cttagaaggttgctcagtgatcgtaatctgaatggtataacccatgtttttgtggatgaa
attcatgaaagaggcatgaatgaagacttcttattgattgtgctaaaggatctgcttcca
cggcgtagggatttaaggttggttttaatgagtgccaccttgaatgctgagctattttca
aattattttggaggtgctcctacatttcgaattccgggtttcacctatcctgttagagct
cactttttagaagatgtgttagaaatgactggatacaagttgacttccttcaaccaaatt
gatgattatggtcaagagaaactgtggaaaacacaaaagcaattagcaccacggaagagg
aaaaatcagatcacttctcttgttgaggatgctctttcaaaatcaagctttgagaactac
agctccagggcacgtgattcagtggcatcttgggcacctgactgcatagggttcaatctc
attgaggctgttctatgccatatatgtcggaaggaacgtccaggtgctgtcttagtgttt
atgaccggatgggaggatataagttctctaagagatcaacttaaagcacatcctctttta
ggagatcccaataggattctacttctaacgtgtcatggttcaatggcaacttcagaacag
aaactcatatttgagaaaccacctccaaatataaggaaagtaatacttgctacaaatatg
gctgaggcaagtataacaatcaatgacatagtttttgtggtcgattgtggaaaagcaaaa
gagaccacgtatgatgctttgaataacacaccttgtcttctaccttcttggatatcacaa
gcatctgcacgtcagagaaggggtagggctggtcgtgtgcagccaggagaatgctaccac
ctttaccccaaatgtgtttatgaagccttttctgaataccaacttcctgaactgctgaga
acacccttgaactctctttgcttgcaaataaaaagtttgcaggttgagagcattggagag
ttcttatcagcagctttacaggcaccggagccacgagctgttcaaaatgctattgacttt
ctgaagatgattggagcactggatgaaaaagaaaatcttacaaatctcgggagttttctc
tctatacttcctgtagatcccaagctgggcaaaatgttaataatgggagctatatttcga
tgctttgatcctgttcttacaattgtagctggccttagtgtcagggatcctttccttttg
ccccaagacaagagggatttagcagggacagcaaagtctaggttttctgccaaagattac
agtgatcatatggctcttgttcgagcatatgaaggatggaaagatgcagaaagagaagga
tcgtcttatgaatactgctggagaaattttctctctgcccaaactcttcaggctattcat
tcacttcggaagcagtttagcttcatcttgaaagatgctggcttggtagatgcagatgca
agcatgatcaacaaattgagtcacaatcagtctcttgtccgtgctgtcatttgttctgga
ctctttcctggcatagcatcggtggtgcacagggagacatccatgtcatttaaaacaatc
gatgatggccaggttttattatatgctaattctgtgaatgcacgttaccagaccatccct
tacccatggttggtttttggtgagaaagttaaggtcaatgctgttttcatccgtgattcc
actggtgtatctgattcaatacttatcctttttggtggtgctctaagtaatgggatacag
gctgggcatctaaaaatgttagatggatatgttgacttcttcatggatcctaatttagct
gactgctatttgaagcttaaggaagcgctcaataagcttatccagaagaagcttgaagat
cctagcattgacattcacaaggaagggaagtacttgatgcttgctgttcaggagctggtt
tcaggggatcaatgtgaaggaagatttgtgtttggccgtgaaagccggaagccaagggcc
tctaatgatgaaaataaattcacaaaagatgggacaaatcccaagagcttgctgcaaaca
ctgttgatgcgagcaggacactccccaccaaaatacaaaaccaaacatctcaagacgaat
gagtttagggcactggtggagttcaagggtatgcaatttgttggcaaaccgaagagaaac
aagcagcttgcagaaagggatgctgctatagaggcattggcttggttgactcatacttct
gacaataatcagcctgaagatgataactctcctcccgacgtcactgataacatgctaaaa
ctcctagggaagcgtagaaaatcaaagcgacgccatgattga
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integrated database retrieval system
