Vreelandella sp. F11: ACFIOZ_01080
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Entry
ACFIOZ_01080 CDS
T11172
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vre Vreelandella sp. F11
Pathway
vre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACFIOZ_01080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vre03021
]
ACFIOZ_01080
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_01080
Enzymes [BR:
vre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACFIOZ_01080
Transcription machinery [BR:
vre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACFIOZ_01080
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACFIOZ_01080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
XHN37959
LinkDB
All DBs
Position
222499..223494
Genome browser
AA seq
331 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLTLNKQGPAVVTAGDIALDHS
VEIVNPDHVIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDHVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttctccgtcctcgcgacatcaaggtcgaagaaatcagc
gcacatcacgccaaaatcgtgctcgaaccgttcgagcgtggctttggtcacaccctgggg
aatgcactacgtcgcattctgctttcttctatgcccggctgtgccgtggtagaggctgaa
atcgccggcgtcgagcatgaatacagtgcgctcgaaggggtgcaggaagatgtcattgag
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
acgctgaacaagcagggcccagccgtcgtcactgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggaccacgtcattgctcatgtcaatgaaggtgccgagctgaaa
attcagcttaaggtagcgctgggtcgtggctacgagccggctgacgcgcgcggctctgat
gaagagacacgtgctattggccgcctgcagctggatgccaccttcagccctgtccgccgt
gtttcctactcggttgaagccgctcgtgtagagcagcgcaccgatctcgataagttaatt
atcgatctggagaccgacggtaccctggatccggaagaggctatccgtcgcagtgcgacc
atcctgcaagagcagctggccgccttcgtcgacctggaagctgataaagagcaggaagtc
gaagaggaagaggatcatgtcgatccaattctattgcgccccgtagacgatcttgagttg
accgttcgcagcgcgaactgcctaaaagccgagaatatttactatatcggtgatcttatt
cagcgcacagaagtggagctgttgaagacaccgaacctcggtaaaaagtctttgaatgaa
atcaaagatgtattggcggctcgcggcttgtcccttggcatgcggttggaaaattggcca
ccggcaagcctgaaggacgacaaagcctccgcgtga
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