Vreelandella sp. F11: ACFIOZ_01805
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Entry
ACFIOZ_01805 CDS
T11172
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vre Vreelandella sp. F11
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vre03016
]
ACFIOZ_01805 (truB)
Enzymes [BR:
vre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACFIOZ_01805 (truB)
Transfer RNA biogenesis [BR:
vre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACFIOZ_01805 (truB)
Prokaryotic type
ACFIOZ_01805 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XHN38097
LinkDB
All DBs
Position
367549..368469
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AA seq
306 aa
AA seq
DB search
MARQRRGLPVNGVLLLDKPKGLSSNHALQRVRRLFQAQKAGHTGTLDPMATGLLPICLGE
ATKFSSHLLEADKVYRTRVELGVITDTGDAEGTVMEQHAVPSLSVDDVEAVLSRFRGEID
QVPPMYSALKHNGKKLYELAREGKQVERAARRVSVYDARLLSFEGTAFELEVSCSKGTYI
RTLAEDIGQALGCGAHISQLRRLKTGPFLADAMWTLEALEALSDQAALEAELMPVDVLVD
HLPLLTVDDTAHSRLAHGQPAALETGALAPDEVARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgtcaacgtcgcggtttgccggttaatggcgtactgctgctggataagcccaag
ggactttccagcaaccatgccctgcagcgtgttcgtcggctgttccaggcgcaaaaagcc
ggccacaccggcacgctagacccgatggcaaccggcttattgccgatttgcctgggcgaa
gccaccaagttctcgtcgcacttgctggaagccgacaaggtgtaccgtacccgggttgaa
ctcggggtgatcaccgataccggcgatgcggaaggtacggtgatggagcagcatgcggtt
cccagcctaagcgtcgatgacgtggaagctgtgctcagccgttttcgcggtgagattgac
caagtgccgcccatgtactcggccttaaagcataacggcaaaaaactttacgagttggcc
cgtgaaggcaaacaggtagagcgtgcagcccggcgcgtaagcgtgtatgatgcgcgcctg
ctatcgtttgaaggcactgctttcgagttggaagtaagctgcagtaaaggcacttacatt
cgcacgttagccgaagatattggccaagcgcttggctgtggcgcgcacatcagtcaacta
agaaggctcaaaacggggccttttttagccgacgcgatgtggacgctagaggctttggaa
gcattgagcgaccaagcggcgctggaagctgagcttatgcccgtggatgtgttggtagac
catttgccgttactgacggtagacgacaccgcccattctcgtttggcccatggccagccc
gctgctctcgaaaccggcgcattagccccggacgaagtagcccgactttattacgccgag
acgtttatcggccttggcgtagtgaaaggtgctcaggaagtggcgcctaagcgactgtta
agtactgtcgctatctcgtga
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