Vreelandella sp. F11: ACFIOZ_01815
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Entry
ACFIOZ_01815 CDS
T11172
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vre Vreelandella sp. F11
Pathway
vre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFIOZ_01815 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vre03019
]
ACFIOZ_01815 (pnp)
03016 Transfer RNA biogenesis [BR:
vre03016
]
ACFIOZ_01815 (pnp)
Enzymes [BR:
vre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACFIOZ_01815 (pnp)
Messenger RNA biogenesis [BR:
vre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACFIOZ_01815 (pnp)
Transfer RNA biogenesis [BR:
vre03016
]
Prokaryotic type
tRNA degradation factors
ACFIOZ_01815 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
KH_Mug60-KHD4
Motif
Other DBs
NCBI-ProteinID:
XHN38099
LinkDB
All DBs
Position
369010..371178
Genome browser
AA seq
722 aa
AA seq
DB search
MLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDDTVVLCTVVARKEANPSQP
FFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVVC
TVLSTDRNHDPDIAALLGTSAALSISGVPFSGPIGAARVGFNEEKGYFLNPTVEELATSE
LDMVVAGTEKAVLMVESEAKELLEDEMLGAVLFGHQEMQVAISAINELVAEAGKPRWEWQ
AAEENQALKTAMADAFEAKVGDAYRITDKMQRQDALAELKEQAIGQLAADEGEPVNDKFS
RDDVKGAFAGLEKRVVRSRVVKGEPRIDGRDNQTVRPLAIEVGVLPKAHGSAIFTRGETQ
AIAVATLGTLRDSQLIESLEGERKDRFMLHYNFPPFSVGEAGFMGGPKRREIGHGRLARR
GVQAMLPSEDTFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLV
KDADGFAVLTDILGDEDHLGDMDFKVAGSEEGITALQMDIKIEGINEEIMELALQQALTA
RLSILEQMNVVISQSRSDVSDNAPSMATIKIDPDKIRDVIGKGGATIRKICEDTGASIDL
DDDGTVRIYAEDKAAAKRAIDTVLAITAEAEIGKLYMGKVVRIADFGAFVNIMPGTDGLV
HISQIVAERVNNVRDFLNEGDDVIVKVLDIDNRNRVKLSMKEITEEEKAAFAAEAAETEA
TI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggaagtcgctgtgaatccggtaaagaaaacgttccagtacggtcgtagcacc
gtcacgctagaaaccgggcgtattgctcgccaggccacgggcgctgtcatggttaccatg
gatgacaccgtcgtgctgtgtaccgttgtggctcgtaaagaggcaaatccgagccaaccc
tttttccccctctcggtacactaccaagagaaaacctacgcagtgggcaagattcctggc
ggcttctttaagcgcgaaggtcgtcccactgagaaagagacgctgacctcgcggctgatt
gaccgcccgattcgtccgctatttcccaaaggctttatgaacgaagtgcaggttgtctgt
accgttctctccaccgaccgtaaccacgatccggatatcgctgctttacttggcacctcc
gcggcgctgagcatctctggcgtgccgtttagtggcccgattggcgcagcccgcgttggt
tttaacgaagagaaaggctacttcctcaacccaacggttgaagaactggccacctctgag
ctggacatggtcgtcgccggtactgaaaaagccgtgctgatggttgagtctgaagccaaa
gagctgctggaagacgaaatgctgggcgccgtactattcggtcaccaggagatgcaggtc
gcgatcagcgccatcaatgaactggttgctgaagcgggcaagccacgctgggagtggcag
gccgccgaagagaaccaggcgctcaaaaccgccatggccgacgcctttgaagcgaaagtg
ggcgatgcttaccgcatcaccgacaaaatgcagcgccaggatgcactggctgagttgaaa
gagcaggcgattggacagctggcagccgacgaaggcgagccggttaatgacaaattcagt
cgcgacgacgtgaaaggtgcttttgcgggtttggaaaaacgcgtagtgcgttcacgggtt
gtcaaaggcgagccgcgtattgatggtcgtgacaaccagaccgttcgcccgctggccatc
gaagtcggtgtgctgccgaaagcgcacggttccgctatctttacccgtggtgagacccaa
gcgattgccgtggcgacgctgggtaccctgcgtgattcccaactgatcgagtccctggaa
ggcgagcgtaaagaccgctttatgctgcactacaacttccctcctttctcagtaggcgaa
gcgggctttatgggcggcccgaaacgtcgtgaaatcggtcacggccgcttggcgcgtcgt
ggcgtccaggcgatgctgccatccgaagacactttcccttacaccattcgtgtggtgtcg
gaaattaccgagtccaatggctcaagctccatggcttctgtgtgtggctcttcgcttgcg
ctgatggacgcgggcgtgccgttgaaagcaccggtcgctggtattgccatgggcctggtg
aaagacgccgatggctttgccgtcttgaccgatatcctgggtgacgaagatcaccttggc
gatatggactttaaagttgccggttccgaagagggcattaccgccctgcagatggatatc
aagatcgaaggcatcaacgaagagattatggagctcgcgctgcagcaagcactgactgcg
cggctgagtattctcgagcagatgaatgtcgtgatcagccagagccgtagcgatgtctcg
gacaacgcgccgtccatggcaacgatcaaaatcgatccggacaaaatccgcgacgtgatt
ggtaaaggtggtgcaaccattcgcaaaatctgcgaagacaccggcgcctctattgacctc
gacgacgatggcaccgtgcgtatctacgcggaagataaagccgccgccaagcgcgccatc
gacaccgtactggcgattaccgctgaagcggaaatcggcaagctgtatatgggtaaagtg
gtacgcattgctgacttcggtgcgttcgttaatatcatgccgggtaccgatggcctggta
cacatctcgcagatcgttgccgaacgcgttaacaacgtgcgcgacttcttgaacgaaggc
gatgacgtgattgtgaaggtactggatatcgacaaccgcaaccgcgtgaagctgtcgatg
aaagagatcaccgaagaagagaaagccgcgtttgccgcggaagcagcggaaaccgaagcg
acgatttaa
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