Vreelandella sp. F11: ACFIOZ_02400
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Entry
ACFIOZ_02400 CDS
T11172
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vre Vreelandella sp. F11
Pathway
vre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ACFIOZ_02400 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vre01007
]
ACFIOZ_02400 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vre03016
]
ACFIOZ_02400 (lysS)
Enzymes [BR:
vre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ACFIOZ_02400 (lysS)
Amino acid related enzymes [BR:
vre01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ACFIOZ_02400 (lysS)
Transfer RNA biogenesis [BR:
vre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ACFIOZ_02400 (lysS)
Prokaryotic type
Other AARSs
ACFIOZ_02400 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
XHN38205
LinkDB
All DBs
Position
524308..525819
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AA seq
503 aa
AA seq
DB search
MANQDASPADNENHLIAERRAKLTARRERAAEQGKSAFPNDFRRDSLTVELQNAFGDKDK
AELEALDHHAAVAGRVMRQRGPFIVIQDVAGQIQLYVDKKGLPAEVLEDVKSWDIGDIVA
AHGPVHKSGKGDLYVMMKEAQLLTKSLRPLPDKFHGLTDMEARYRQRYVDLIMNPQSRKV
FETRAAVISSMRRFFEARGFMEVETPMLQPIPGGAAARPFITHHNALDIDMYLRIAPELY
LKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMVEFYWAYADYRDLLDMTEAMLRTAAE
EVLGNAVIEYQGASYDFGKPFARLTLRQAILDHGDGIADSDLDSLEAARATAEKLGIKVK
ESWGLGKVQTEIFEEVAEHKLDQPTFITEYPAEVSPLARRNDANPFVTDRFEFFVGGREI
ANGFSELNDAEDQADRFRAQSAEKDAGDLEAMYYDADYVRALEYGMPPTAGEGIGIDRLV
MLFTDSASIRDVLLFPAMRPEVD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccaagacgcgtctcctgcagacaacgaaaaccacctgatcgccgagcgccgt
gccaagctgactgctcgccgtgagcgcgccgctgagcagggaaagagtgcgtttcccaat
gactttcgccgcgacagcttaaccgtcgagctgcaaaatgccttcggcgataaagacaag
gccgagcttgaagcgctggatcaccacgccgctgtggctggtcgtgtgatgcgtcaacgt
ggccccttcatcgtcattcaggacgtggccgggcagatccagctctacgtcgataaaaag
ggcctgcctgccgaggtactggaagacgttaaaagctgggacatcggtgacatcgtcgct
gcccacgggccggtgcataaatccggcaagggcgacctgtacgtgatgatgaaagaggcg
caactgctcaccaagagcctgcgcccgctgccggataagtttcacggcctcaccgatatg
gaagcccgctatcgccagcgctatgtggatctgatcatgaacccgcagtcgcgcaaggtg
tttgaaacccgcgccgcggtgatcagctccatgcgccgcttctttgaagcgcgcggtttt
atggaagtagagacgccgatgctccagccgatccccggcggcgcggcggcacggccgttc
attacccaccacaatgcgctggatatcgacatgtatctgcgtattgcgccagagctttac
ctcaagcgtctggtggtgggcggttttgaaaaagtgttcgagattaaccgcaacttccgc
aacgaagggttatcaacgcgccacaacccagaattcaccatggtggagttctactgggcc
tatgcggattaccgcgacctgctcgatatgaccgaagcgatgctgcgcacagccgctgaa
gaagtgctcggtaacgcagtgattgagtatcagggggcaagctacgatttcggcaaacct
tttgcccgcttaacgctgcgtcaggcgattcttgatcacggtgacggcattgccgacagc
gacttggattcgttggaggcggcgcgggcaaccgctgaaaagctcggcatcaaggtcaaa
gagagctggggtctgggtaaggtgcaaacggagatatttgaagaggttgccgagcacaag
ctcgaccagccgacctttatcaccgaatacccggcggaagtgagtccgctggcgcggcgt
aatgacgctaatcccttcgtcaccgaccgctttgagttctttgtaggggggcgcgaaatc
gccaacggcttctcggagcttaacgacgccgaagatcaggcggatcgcttccgtgcccag
tccgcggaaaaagatgccggtgacctggaagcgatgtactacgatgcagattacgtgcgt
gcgttggagtacggcatgccgcccaccgcgggcgaaggcatcggtatcgaccgcttggtg
atgctgttcaccgacagcgcctcgattcgcgatgtactgctgttcccggcgatgcgccct
gaagtggactaa
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