Vreelandella sp. F11: ACFIOZ_08935
Help
Entry
ACFIOZ_08935 CDS
T11172
Name
(GenBank) TRAM domain-containing protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vre Vreelandella sp. F11
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vre03009
]
ACFIOZ_08935
Enzymes [BR:
vre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACFIOZ_08935
Ribosome biogenesis [BR:
vre03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACFIOZ_08935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRAM
Methyltransf_25
Cons_hypoth95
SAM_MT
Methyltransf_31
DREV
Methyltransf_11
Methyltransf_23
MTS
TehB
Methyltr_RsmB-F
RrnaAD
Methyltransf_15
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
XHN39461
LinkDB
All DBs
Position
1977530..1978927
Genome browser
AA seq
465 aa
AA seq
DB search
MAMLGKRRPPRPASGHSGLARSPGGKAPHTAIEDASPLVIERLAHDGRGVAHAANGKTVF
VDQALPGEQVEVAIHLTRKRFDEAHIKSLLSTSERRVAPPCPHFGHCGGCDLQHLGIDDQ
RDHKREVVRDLFSRQGITLTDIGLLQGSDQGYRRRARLGVKVDGQGDTRLGFRAAHSHRL
VDIERCPVLVDPLQQLLLPLRELLGTLEAPRQVGHIELMATATEQVVLVRQLKEHAGDAK
RWQAFAQQQGVALGTWLGRETPALHWHGAAPTLEELLTVEGQAPLSLSFAPGDFLQVNAQ
VNQQMVAQVIQWLAPKSGQKLLDLFAGIGNFSLPIAAAGAEVHAVEGNPAMVARIAINAK
RNQLMVSGQQADLNSASSVNALLTEHGGSDALVLDPPRSGAEVICKALARHPVPRVVYIS
CDPATLARDAAHLVHAGYRVKQVAVADMFLHTAHMETLMLFEYGE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgggaaaacggcggccgcccaggcccgcatcagggcactctgggctggcg
cgttcgccgggcggtaaggctccgcatactgctatagaggatgcgtcgccgctggtcatt
gagcgtttggcccatgatgggcgcggggttgcccacgctgccaacgggaaaaccgtattt
gtcgatcaggcactgcccggtgagcaggtcgaagtggcgattcatctgacccgcaaacgt
tttgacgaagcgcatatcaaatcgctgctgagcacttccgagcgacgcgttgcacctcct
tgcccacatttcggtcactgcggtggctgtgatctacagcacctggggattgatgaccag
cgcgaccataagcgcgaagtagtgcgcgatctattttcgcgccaaggaatcacgctaaca
gatattggcttgttgcaaggcagcgaccaaggctatcgacgccgtgcgcggctgggcgtc
aaagtggatggtcagggtgatacgcggctcggctttcgggcggctcacagccaccggtta
gtcgatattgaacgctgcccggtgcttgtggatcccttacaacagctgctactacccctg
cgtgaactgttgggcacgctagaggcgccgcggcaggtaggccacattgaattaatggcc
acggcgacggaacaggtcgtattagtgcgtcagttaaaagagcacgccggggacgctaaa
cgctggcaagcctttgcgcagcagcaaggagtggcgctgggcacctggttggggcgtgaa
acgcctgcactgcactggcatggtgcagcgccgacgcttgaagagttgctaaccgtagaa
ggtcaagcgccgcttagcttaagttttgcaccaggggattttttacaggtcaacgctcag
gtgaaccaacaaatggtcgcccaggtcattcagtggcttgcgcccaagtcagggcaaaaa
ctactcgacctttttgccggtatcgggaattttagcctgcccatagcggcagcgggcgct
gaggtgcatgcggtagagggtaaccctgccatggtggcgcgcatagccattaatgccaag
cgtaaccaactgatggttagcggacagcaggctgatttgaacagcgcttccagcgtaaat
gcgctattaactgagcatggcggtagcgatgcattggtactcgacccgccgcgtagcggc
gctgaagtcatttgcaaggcgctggcgcgccacccggtgcccagggtggtctatatttct
tgtgatccggcgacgcttgcccgggatgcggcacatcttgtgcatgcgggttaccgagtc
aagcaagtagcagtggcggatatgttccttcacactgcgcatatggaaacgctgatgctg
ttcgagtacggggagtag
DBGET
integrated database retrieval system
