Vreelandella sp. F11: ACFIOZ_09390
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Entry
ACFIOZ_09390 CDS
T11172
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vre Vreelandella sp. F11
Pathway
vre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACFIOZ_09390 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_09390 (nfo)
Enzymes [BR:
vre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ACFIOZ_09390 (nfo)
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACFIOZ_09390 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
XHN39551
LinkDB
All DBs
Position
complement(2080180..2081022)
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AA seq
280 aa
AA seq
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MKYLGAHVSAAGGADQAVQRAVEIGADAFALFTKNQRQWKGKPLTDEAIQAFRDACAEHD
FAPKQILPHDSYLINLGHPEKEGLRKSRDAFLDEMQRCEQLGLTLLNFHPGSHLNKISES
DCLKRIAESVNEALTHTQGVTAVIENTAGQGTNLGWRFEHLAEIIAHVDDKTRVGVCIDT
CHAFAAGYDLRTTAATQAILDELGSVVGFEYLRGMHLNDAKSNLASRVDRHHSLGKGNIG
LPAFTTIMQEPRINAIPMILETIEPEIWADEIAWLRAQAP
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtacctaggagcccatgtgagcgccgctggcggtgcagaccaagccgtgcagcga
gcggtggaaattggtgcggatgcgtttgcgctattcaccaaaaatcagcgtcaatggaaa
ggtaaaccgctcaccgatgaggcgattcaagcctttcgcgacgcctgcgccgagcatgac
tttgcccctaagcagattttgccccacgacagctatctaattaatctgggtcaccccgag
aaggaaggcctgcgcaaatcccgggatgcctttctggatgagatgcagcgctgcgagcag
ttgggactgacgctgcttaatttccaccctggcagccatttgaacaaaatcagcgaaagc
gactgcttgaaacgtatcgcagaatccgtcaatgaagcgctaacgcatacccagggcgtc
actgcggtgattgaaaataccgctgggcaaggtaccaacctgggctggcgcttcgagcat
ttggccgaaatcattgcccacgtggacgacaaaacccgcgtcggggtatgtattgacacc
tgccatgcctttgcggcgggctatgatctacgcacgacagcggccacccaggcaatcctt
gatgagctaggcagcgttgtcggctttgagtatctgcgcggcatgcatttaaacgatgcc
aaaagcaaccttgccagccgcgtggatcgccaccatagcctgggcaaaggcaacatcggc
ctgcccgcctttaccactatcatgcaggaaccacgaattaacgctattcccatgatcctg
gagactatcgagcccgagatatgggccgatgaaatagcttggctacgcgctcaagccccc
tga
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