Vreelandella sp. F11: ACFIOZ_09905
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Entry
ACFIOZ_09905 CDS
T11172
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vre Vreelandella sp. F11
Pathway
vre03030
DNA replication
vre03430
Mismatch repair
vre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFIOZ_09905
03430 Mismatch repair
ACFIOZ_09905
03440 Homologous recombination
ACFIOZ_09905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vre03032
]
ACFIOZ_09905
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_09905
Enzymes [BR:
vre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFIOZ_09905
DNA replication proteins [BR:
vre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFIOZ_09905
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFIOZ_09905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
PAS_4
PAS
PAS_8
Motif
Other DBs
NCBI-ProteinID:
XHN39643
LinkDB
All DBs
Position
complement(2192867..2194927)
Genome browser
AA seq
686 aa
AA seq
DB search
MTRGGLPKRQRLIGLWLLLSGISVLGGAIFAAWLDAQLAPTGVTRIALWVGSFSGGATIF
LVGLVLERMLFTPLRHLQVQLARLVANPDARDEHPPEGWLKGLGPDLRRVRESWRSDRSR
LATAHADGARSAARIRQELETLLQVLETPLLLCDHHRRLMLFNQAAEDFFESNTGLGLGK
RLEALLPVASLQQMLSQLPNDGSPRELLAPCDDRWLKVILRRVPGSDGETLLTFSDATAS
WSSEMGVRAELADMLTPLRQHTASLTSAADALIQLRNQNDASTSALRQRFERVIQEEGAT
LGDNVAKIGQLLDDMQHQGERLTPMWSNDFWQALDERLDPEHRLITPVGMPAWFKGDAPA
LIALFDSLVKHLNAHLPDSGFEGEICLGNKRVYLDLIWRGKAIPEHELGEWRQQPLNSLP
LTPSVADVLRQHASDIWSLADDNGIYSRLRLPLPAMERVGAPRETAPPRPEFHDFGIADL
PPPDEALACRTLRSLEIVAFDTETTGLELRRGDTVISLGACRVVNARLLASEVFDQKVDP
QRPIPPASTAIHGLTDADVIGAPPLDIVLTRFRDYVGEAVLLAHNAAFDLLAISHKGVAF
DIPIIDTLLISRALDEALDGHDLDSLAQRYDLAFPPGTRHTALGDARVTAELWLALLPRL
EARGVDTLEQLLALQANAFDRQDASA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaggcgggctgcccaaacgtcagcgcctgattggtctctggctgctgctcagc
ggcatcagtgtgttgggtggggccatttttgccgcctggttggacgcccagctcgccccc
accggggtaacccgcatcgccctctgggtaggcagcttctccggtggagcaacgattttt
ttagtcggtttggtgcttgagcgcatgctgtttactccactgcgccatttacaggtgcag
ctagcgcgcttagtcgccaatcctgatgcccgggacgaacacccacctgaaggctggctc
aaaggactggggcccgacctacgccgtgtacgcgaaagctggcgttcggatcgtagccgt
ttagccaccgcccacgctgacggcgcccgcagcgcggcacgcattcgccaagagttggaa
acgctgctgcaagtgcttgaaacaccgctgctactgtgcgatcaccaccgccgtcttatg
ctgttcaaccaggcggcagaggactttttcgagagtaatacaggactgggactgggcaaa
cgcctggaggcgctgctaccggtggcgagcttacagcaaatgctaagccaactgcccaac
gacggctccccaagagagctactagcgccctgcgatgaccgctggctcaaggtgattttg
cgccgcgtgccgggtagcgatggcgaaacactgctgacctttagtgatgccaccgcctcc
tggtcgagtgaaatgggcgttagggcggaattggccgatatgctgacaccgctgcgtcag
cataccgccagcctgaccagcgccgccgatgcattgattcaactgcgcaatcaaaatgat
gccagcacgtctgctttgcgccagcgttttgagcgggttatccaagaagaaggcgctaca
ctcggcgacaacgtggctaaaatcggccaattgctcgacgatatgcaacaccagggcgag
cgcttaacgcccatgtggtcaaacgacttctggcaagcgctggacgagcgtcttgacccg
gagcaccgcttaatcaccccggtgggcatgcccgcttggtttaaaggcgacgcccctgcg
ttgatcgcgctgtttgactcactggtcaaacacctcaatgcccaccttcctgacagtggc
tttgaaggtgagatatgcctgggtaacaaacgcgtctacctagaccttatttggcgtggc
aaggcgatccccgagcatgaactgggggagtggcgccagcagccgctcaactcactgccg
ttgacgcccagcgtcgccgatgtgctacgccaacacgccagcgacatctggagcttggcc
gacgataatggcatttattcacgcctaagacttcccctgcctgccatggaacgcgtcggc
gcccctcgcgaaaccgctccgccgcgtcctgagttccatgactttggtattgccgacctg
cccccaccagatgaagcgctggcctgccgaacgctgcgcagcctggaaatcgtcgctttt
gatacagaaacaacagggcttgagctgcgccgtggcgacacggtaatcagtcttggcgcc
tgccgcgtggtcaacgcgcgtttattggccagcgaggttttcgatcaaaaagtggatccc
cagcggccgatcccgcctgcaagcaccgcgattcacgggctgaccgatgccgacgtgatt
ggcgcgccgccgctggatatcgtgcttacccgctttcgtgattatgtcggtgaagcggta
ctgcttgcccataacgctgcctttgatctgctcgccatcagccacaagggggtcgccttc
gatatccccatcatcgacaccctgctgatttcacgggcactggacgaagcactcgatggg
catgatctggatagcttggcccagcgctatgacctggcttttccacccggcacccgccac
actgcgttaggcgatgcccgcgtcaccgccgagctatggttagccctgctgccacgcctg
gaagcccgtggagtcgatacacttgagcaactgctggcgctgcaagccaacgccttcgac
cgacaggatgccagtgcctga
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