Vreelandella sp. F11: ACFIOZ_10480
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Entry
ACFIOZ_10480 CDS
T11172
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vre Vreelandella sp. F11
Pathway
vre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACFIOZ_10480 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_10480 (uvrB)
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACFIOZ_10480 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACFIOZ_10480 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF87
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XHN39751
LinkDB
All DBs
Position
2306371..2308395
Genome browser
AA seq
674 aa
AA seq
DB search
MSKAFRLQSKFQPAGDQPAAIKGLISGLESGLAHQTLLGVTGSGKTFTMANVVEQQQRPT
IVMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDSEIDTIRLFDPLTGAVHGEVPR
MTIYPKSHYVTPRETILGAIDAIKEELKERLEWMRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWEAISPQTIFVSATPGRYEDEHASQTVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIGLRTAVGERVLVTTLTKRMAEDLTEYFDEHGIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNAHGKAILYGDRITDSMRKAIDETERRRAKQTAHNDEHGITPTTVTRSVADILEAAQ
APGKKSSRRRGSERKVAESAAEYDVTTMSNQDLLGAISKLEDAMFEAAQNLEFEEAARLR
DQLHQMKEKQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcctttcgattgcagtcaaaatttcagccagctggcgaccagccggccgcc
attaaggggctgatcagtggcctggaatcagggcttgcccatcaaacactgctgggggtc
actgggtcgggcaaaaccttcaccatggccaacgtggtggaacagcagcagcgtcctacc
attgtgatggcgccaaacaagacgcttgcggcccagctgtacggcgaatttaaagcgttt
ttcccggataacgccgtagagtatttcgtctcctactacgactactatcagccggaagcc
tatgtgccttcttcggatacgtttattgagaaggatgcctcaattaacgaccatattgag
cagatgcggctctccgccaccaaggcactgctggagcgccgcgatgcgctgatcgtggta
tcggtatcggcgatttatggcctgggtgatcctgaccagtacctgaaaatgcgtttgcat
tttacccgtggcgagctcattgatcagcgcgcctttctgcgccgcttggctgagcttcag
tacactcgcaatgatatggattttcgccgtggcacctaccgtgtgcgtggtgatgtgatc
gatattttccccgccgactctgatgaagaggcggtgcgggtggagctgttcgacagtgaa
atagatacgattcggctgtttgatccgctcactggtgccgttcacggcgaagtgccgcgg
atgaccatctaccccaaatcgcactatgttaccccccgggaaacgatcctgggcgccatt
gatgcgattaaagaggaactgaaagagcgcctggagtggatgcgcaagcatgagcgtttg
gtggaggctcagcgccttgaacagcgcaccctttacgatattgagatgatgctggagttg
ggttactgcaacggtatcgaaaactactcccgttacctctctgggcgagcccccggagag
ccgccaccgacgttcttcgactatctgcccgatgacgcattgctgtttatcgacgagtct
cacgtcagcgtgccccaggtaggcggcatgtataaaggcgatcgttcgcgcaaagagaca
ttggtcgagtatggcttccggctgccctcagcgctggataatcggccgatgaagtttgaa
gagtgggaggccatttccccgcaaacgatctttgtctccgccacccccgggcgttacgaa
gacgagcatgccagccagaccgttgagcaggtggtgcgtcccaccgggctattggatccc
gaaattgaagtgcggccggccagcactcaggtagatgatctgctttcggaaattggtttg
cgcactgccgttggtgagcgggtgctggtgaccacgctaaccaaacgcatggcggaagac
ctgaccgaatattttgacgagcacggcattcgggttcgctacttacactcggatatcgac
accgtcgagcgggtggagattattcgtgatctgcggctcggcaagtttgatgtgttggta
ggcatcaacctgctgcgcgaaggtctggatattcccgaggtgtcgctggtggcgattctg
gatgcggacaaagagggctttctgcgtgcggagcgctcgctgatacagaccattggccgc
gcggcccgtaacgcccatggaaaggcgattctgtatggtgatcggattaccgactcgatg
cgcaaggcaattgatgagaccgagcgtcgccgcgccaaacagactgctcataacgatgag
catggcattacgccgaccaccgtgacgcgctcggtggccgatatacttgaagccgcccag
gcaccaggtaagaagagcagtcgtcgacgcggcagcgagcgtaaagtcgcggagagcgct
gcagagtacgatgtcaccaccatgagcaatcaagacttactgggtgccatcagtaagctt
gaggatgcgatgttcgaagcggcgcaaaacctcgagtttgaagaggcggcgcggcttcgc
gatcagctccatcaaatgaaagaaaaacagttggcgctgggctag
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