Vreelandella sp. F11: ACFIOZ_11220
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Entry
ACFIOZ_11220 CDS
T11172
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vre Vreelandella sp. F11
Pathway
vre03030
DNA replication
vre03430
Mismatch repair
vre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFIOZ_11220
03430 Mismatch repair
ACFIOZ_11220
03440 Homologous recombination
ACFIOZ_11220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vre03032
]
ACFIOZ_11220
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_11220
Enzymes [BR:
vre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFIOZ_11220
DNA replication proteins [BR:
vre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFIOZ_11220
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFIOZ_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XHN35675
LinkDB
All DBs
Position
2457708..2459105
Genome browser
AA seq
465 aa
AA seq
DB search
MSETALIFIDVETTGTRTTRDRITEIAALKVVNGELVDRWTSLINPECKVPAQITQLTGI
RDDMLVDAPRFTQIAESFREWLGDGQLVAHNARFDYGFLRNEFKRAGQEYRASLLCTLRL
SRRIAPQERQHNLKALLSRYAITSIRQHRAGDDVEALWSLWQAWQVEHSDEAWQRLLGDE
RRHRTLPAHLDSAQLEGLPACPGVYLFYGHNRLPLYVGKSINLRSRVLGHFQRDHHDDKE
MRLAQQVQHIEWEETAGDLGAQLREAQLVKTLMPIMNRQLRKQRKLTTWHWAEEADHPEL
LSGSALSQPLNRPQGGTLYGLFRNAREAKSALRGIAEEQQLCPRVLGLEKGKGRCFANQV
GKCLGACNGQESIAAHTQRAKAALKQLQVNVWPWPGSIAIEEQPAGSAAPAWHVVRQWCY
LGSASSLNKAQTLAETSASFDVDSYRILNRFLRYPEQHGLTITPL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacagctttaatctttatagacgttgagaccaccggcacccggacgactcgg
gataggattactgaaatagccgcccttaaagtcgtcaacggcgagctagtggatcgctgg
acaagcttaataaatccagagtgcaaagtgcccgcgcagattacccaactgacggggatt
cgtgatgacatgctggtggatgcgccccgcttcacacagatagccgaatcatttcgggag
tggttaggtgacggtcagctagtggcccacaatgcgcgctttgactatggctttctgcgc
aacgaatttaagcgcgccgggcaggaataccgcgcgtcattgctatgcacgctacgctta
tcacgccggatagcgcctcaagagcgccagcacaacctgaaagcactgctgagtcgctac
gccatcacctccatccgccaacaccgtgctggagacgacgtagaggcgctgtggtcactc
tggcaagcgtggcaagttgagcacagcgatgaagcgtggcagcgcctactgggggatgag
cgccgccaccgcacactgcccgcccatctggatagcgcccagttggagggtttgcctgcc
tgccccggcgtttatctgttttacggccataaccggctgccactctacgtgggcaaaagc
atcaatctgcgcagccgtgtgctggggcattttcagcgcgaccaccatgacgataaagag
atgcgcctcgcccaacaggtgcagcacatcgagtgggaagagactgctggagatttaggc
gcccagttgcgtgaagcgcagctggtgaaaacgttaatgccgattatgaaccgccaacta
cgcaagcagcgtaagttaacgacctggcactgggccgaggaagccgaccatcctgagtta
ctcagtgggagcgccctgagccagccgctgaaccggccacaaggtggcacgctgtatggg
ttgtttcgtaatgcccgagaggccaagagcgcgctgcgtgggattgccgaggagcaacag
ctctgccctcgggtactagggcttgaaaaaggtaaggggcgctgttttgccaaccaggtg
ggcaagtgccttggagcgtgcaatggtcaggagtcaatagctgcacatacccagcgggca
aaggcagcgctcaaacagcttcaggtcaatgtgtggccctggccaggcagtattgcaatt
gaagaacagccagcgggcagtgcagcccccgcctggcatgttgtccgccaatggtgttac
ctgggcagtgcatcaagccttaacaaagcacaaactctggcggaaacgtcggcaagtttc
gatgtggatagctaccgaattttgaaccgcttcttacgctacccggagcagcacggcttg
acgattacgccactctga
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