Vreelandella sp. F11: ACFIOZ_13685
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Entry
ACFIOZ_13685 CDS
T11172
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vre Vreelandella sp. F11
Pathway
vre00061
Fatty acid biosynthesis
vre00071
Fatty acid degradation
vre01100
Metabolic pathways
vre01212
Fatty acid metabolism
vre02024
Quorum sensing
vre04146
Peroxisome
Module
vre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ACFIOZ_13685
00071 Fatty acid degradation
ACFIOZ_13685
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ACFIOZ_13685
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACFIOZ_13685
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vre01004
]
ACFIOZ_13685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vre04147
]
ACFIOZ_13685
Enzymes [BR:
vre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ACFIOZ_13685
Lipid biosynthesis proteins [BR:
vre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ACFIOZ_13685
Exosome [BR:
vre04147
]
Exosomal proteins
Exosomal proteins of breast milk
ACFIOZ_13685
Exosomal proteins of breast cancer cells
ACFIOZ_13685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AbiTii
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
XHN36146
LinkDB
All DBs
Position
complement(2985648..2987333)
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AA seq
561 aa
AA seq
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MSEHANAAVLRGPALEGLDQYDSVTDVFHHAVARFKDKPAFSCMGKTLTFADLDRFSAQF
AAWLQHETDLVPGDRIAIQLPNVLQFPVAVFGALRAGLVVVNTNPLYTEREMAHQFKDSN
AKAIVILANMADKLEKVLDKTEIKHVIVTQLADLHDLPKRWLINAVVKHVKKMVPAYSLP
SAIGFRDALKKGASLSHTEVKRSPNDLAALQYTGGTTGMPKGAMLTHRNLIANMLQAREA
IGPHLTDGEELVIAPLPVYHIYTFTVNCLFLMETGNHSLLITNPRDLDGFVKELKGLPFT
AFIGLNTLFNALCNRDDFKQLDFSKLKLTISGGMALTKAAAQRWETTTGCPIAEGYGLTE
TSPIVSFNPTDAIQLGTIGKPVAGTAVKVVDGEGNDVALGEPGELCVQGPQVMKGYWQRE
DETRDAIDEDGWFHTGDIAVLQEDGYIRIVDRKKDMILVSGFNVYPNEVEDVVAAHPDVL
ESAAVGVPDENAGEAIKLFVVSKNDQLDEKTLRDWCKKELTGYKVPKIIEFREELPKTNV
GKVLRRQLRDEEPSKTSSDSH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacgccaacgccgccgttttacgtggcccagcgcttgaagggttggatcag
tacgattcagtcacggatgtttttcatcacgcagtagcacgttttaaggacaagcccgct
ttttcttgtatgggaaaaacgctcactttcgctgaccttgaccgcttctctgcgcagttt
gctgcttggctgcagcatgaaaccgacctcgtccccggcgatcgtatcgccattcagttg
cccaatgtgctgcagttcccagtagcggtttttggcgcgctacgggcaggcttggtggtg
gttaacaccaacccgctatacaccgagcgggaaatggcccatcagtttaaggactccaac
gctaaagccattgtgattttggccaatatggcggacaagctggagaaagtgctcgataaa
acagagatcaaacacgttattgtcacccagctagccgatttgcatgatcttcccaagcgc
tggctaatcaacgcagtggtcaagcacgttaagaaaatggtgcctgcttattctttgcca
agtgcgattggttttcgcgatgcgctaaaaaaaggcgcttcgttaagccataccgaggtc
aaaagaagccctaatgacttagccgcgcttcaatacacgggcggcaccacagggatgcca
aagggggccatgctgactcatcgcaacctcatcgccaatatgctgcaagcgcgtgaagcg
attgggcctcacctcaccgatggcgaagagctggttatcgcaccgcttccggtttatcac
atctacacttttacagttaactgcctgtttttgatggaaaccggcaaccattcgttgctg
atcaccaaccctcgtgatctggatggttttgtcaaagagctgaaggggttgccctttacc
gcctttattggtctcaacacgctgtttaatgcgttatgtaaccgtgacgacttcaagcag
ctcgatttttccaaattaaagctgacgatttccggcggtatggcgctgaccaaagcagcg
gcgcagcgctgggaaaccaccaccggttgcccgatcgccgaggggtatggtctgaccgag
acatcgcccatcgttagttttaaccccaccgatgcgatccaactaggcaccattggtaaa
cctgtcgcgggcaccgcggtaaaagttgtcgatggcgagggcaatgacgtcgcactgggt
gagccgggagaactctgcgtgcagggcccgcaagtaatgaaaggctactggcagcgcgag
gacgaaacccgcgacgccattgatgaggatggttggttccacaccggcgatatcgcagtg
ttgcaggaggatggctacattcgcatcgttgatcgcaaaaaagacatgattctggtctcc
ggcttcaatgtttaccccaacgaagttgaagatgtagtggctgcccacccggatgtgctt
gaatcggcggcagtcggtgtgccggatgaaaatgccggtgaagccatcaagctgttcgtg
gtcagtaaaaatgaccagctggatgagaaaacgctgcgtgactggtgcaaaaaagagctc
actggctacaaggtgcccaagatcatcgagttccgcgaggaactgcccaaaaccaacgtc
ggcaaagtgctccgccgtcaactgcgtgacgaggagccttcaaaaacgtcatcagatagc
cattaa
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