Vreelandella sp. F11: ACFIOZ_13740
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Entry
ACFIOZ_13740 CDS
T11172
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vre Vreelandella sp. F11
Pathway
vre03030
DNA replication
vre03430
Mismatch repair
vre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFIOZ_13740 (dnaX)
03430 Mismatch repair
ACFIOZ_13740 (dnaX)
03440 Homologous recombination
ACFIOZ_13740 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vre03032
]
ACFIOZ_13740 (dnaX)
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_13740 (dnaX)
Enzymes [BR:
vre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFIOZ_13740 (dnaX)
DNA replication proteins [BR:
vre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFIOZ_13740 (dnaX)
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFIOZ_13740 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
AAA_18
AAA_30
AAA_2
AAA_19
Mg_chelatase
nSTAND3
AAA_28
TsaE
AAA_24
Rad17
Herpes_Helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
XHN36157
LinkDB
All DBs
Position
complement(2998247..3000307)
Genome browser
AA seq
686 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQAHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTANGRGDEGITSTPCGQCDSCQAIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPPTVLSRCLQFT
LKHMPPERVVEHLTYVLGEEHVEFDESALWLLGKAAEGSMRDAMSLTDQAIAFGQGAVRH
ADVAAMLGTLDHRHILGLAEALADVDVQRLLAEVAQLAEQGPDFAAVLDELSSMLHRLAV
AQMVPDAVDNSHGDRDVILQLASRFTAEDIQLYYQIGIQGRGDMVHAPDLRSALEMTLLR
MLAFRPQGVPKPPRTPLPLRREAPLEATAAADASAHAAEAEAESSAPLHTSPEAEARPDA
EPDVQSKPPAEPQSQPETVMPAAAEAPPLQEPPPWTVEADTGVTEVEAPQQQPPEPAALA
EPKHTAEPEHTAEPEPTLTPETASESEALEPTMAESPTVPPEALSDAIPETQPDAVPETV
SETVSETVPATRPGILDNAKWLEGFDSLGLGGLTRNLAGNCLVESDDGTLLTLRLDPSQE
AMQAEVHQTRIERALKEQGMPRRIAFYVAELSNSLETPRQREERLNKERHAQAVDLLNHD
PHVQKLQQAFGAKLIESSVKPADAMR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgaaagtggcggcctcgcacattccacgaactcgtgggt
caggcccatgttcaacgcgctttggtcaacgcccttgatcagggccgtctgcaccatgct
tacctatttacgggtacccgcggggtgggtaaaaccaccttggcgcgtatccttgccaag
tgtttgaattgcacggccaatggccgtggcgatgaaggcattacctctacaccctgcggc
cagtgcgatagctgtcaggcaattgatgaagggcgctttgttgatctcattgaggttgat
gcggcttcaagaaccaaagtagaagatacccgggaactgctggacaatgttcagtacgcg
cctacccaagggcgttataaggtgtacctgattgatgaggtgcatatgctctccaccagc
agtttcaatgcgctgctgaaaaccctggaagagccacctccccacgttaaatttctgctg
gcgaccacggatccacaaaagctgccgccgacggttctttctcgctgtctccaatttacc
cttaaacatatgccgccagagcgcgtggtggagcacttgacctatgtgctgggtgaggag
catgttgagtttgacgaaagtgcattatggctattggggaaagcagcggaaggctcaatg
cgcgatgccatgagcctaaccgaccaggcgattgcctttggccagggggccgttcgccat
gcggatgtagccgccatgctgggcaccctggatcatcgtcatatacttggattggcagaa
gccctggccgatgtcgatgtgcagcggctgctggccgaggtagcccagttagctgaacag
ggccccgattttgccgcagtgctggatgagctatccagcatgctccaccgtttggcggtg
gcgcagatggtgccggacgccgtggataacagccacggtgatcgtgacgttattctgcag
ctagcgagtcgtttcaccgctgaagatattcagctctattaccagattggtattcagggc
cgtggggacatggtgcatgcccccgatctgcgcagcgcgttagagatgacgctactgcgc
atgctggcgtttcgcccccagggcgtgccaaaaccgccgcgcactccgttaccgctgcgc
cgcgaagccccattagaggcaacagcggcggctgatgcgagtgctcatgcagcagaggcg
gaagctgaatcatcagcgccacttcacacctcgccggaagctgaagctcggccagacgct
gagccagacgttcaatcaaagccaccagccgagcctcaatctcagcctgaaacggttatg
cctgctgccgcagaggcgccaccgctgcaagagccacctccttggacagtggaagcggat
acaggcgtgaccgaggtggaagctccccagcagcaaccccctgagccagcggcactggct
gagccgaaacatactgctgagccggaacatactgctgagccagagccaaccttaacgcct
gaaacagcctctgagtccgaggctttagagcccactatggctgagtcgccaacagttcca
cctgaggcgctatcagacgccatcccggaaacccagccagatgctgttccagaaactgtt
tcagaaaccgtttcagaaactgttccagcaacccggccaggcatactggataatgctaag
tggttggagggcttcgactccctgggtttgggggggttaacccgtaacctggcgggcaac
tgtttggtcgagagtgacgacggcacgttgctgacgctgcgcctggatcccagtcaagag
gccatgcaggcggaagtgcatcaaacccgcattgagcgggcgttaaaagagcagggcatg
ccacggcggatagcgttttacgtggccgagttgtctaatagcctggaaacgccccgccag
cgcgaagagcgacttaataaagagcgtcacgctcaagcggttgatctactcaatcacgac
ccccatgtacagaagctgcagcaggcatttggggccaagttgatagaatccagcgttaag
cctgccgatgcgatgcgctaa
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