KEGG   Vreelandella sp. F11: ACFIOZ_15980
Entry
ACFIOZ_15980      CDS       T11172                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vre  Vreelandella sp. F11
Pathway
vre03030  DNA replication
vre03430  Mismatch repair
vre03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACFIOZ_15980
   03430 Mismatch repair
    ACFIOZ_15980
   03440 Homologous recombination
    ACFIOZ_15980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vre03032]
    ACFIOZ_15980
   03400 DNA repair and recombination proteins [BR:vre03400]
    ACFIOZ_15980
Enzymes [BR:vre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ACFIOZ_15980
DNA replication proteins [BR:vre03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ACFIOZ_15980
DNA repair and recombination proteins [BR:vre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ACFIOZ_15980
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: XHN36573
LinkDB
Position
complement(3486000..3486725)
AA seq 241 aa
MFGIRPRQKITQADWKGFMAQRAQQAKNPALQQFFGTPLPDPETPISEVPMVALDMETTG
LDERRHAIVSIGLVPFTLNRIKLAERRYWVVNPSRPLAEASITYHHITHSEIAHAPDLDE
ILDALLAQLAGRLVVVHFRNIERPFLNAAVKTRRGEGVLFPMIDTMSLEARLHRQTLWAR
FRRWLGRPPVSIRLHASRERYGLPAYQGHHALVDALATAELLQAQIATHYRPDTPLKDMW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttcggtatacgcccacgtcagaaaattacccaggccgactggaagggcttcatggct
cagcgggctcagcaggcgaaaaatcctgcgcttcagcaattttttggtacaccgttgcct
gaccctgaaacgcccatttccgaggtgcccatggtggcgctggacatggagaccacgggg
ctggatgagaggcgacatgcgattgttagtatcggccttgtaccctttacgttaaatcgt
atcaaattggctgagcggcgttactgggtagtgaacccttcaagaccgttagcagaagcc
tcaattacctaccaccatattacccactcagagatcgcccatgcgccggacttggacgag
atcctggacgcactgttggcccagttagcaggtcgcctagtggtcgttcattttcgcaat
attgagcggcccttcttgaacgcggctgtcaaaacccggcgtggggaaggggtgctgttt
ccgatgattgataccatgtcgctggaagcgcggctgcatcgccagaccctgtgggcgcgt
tttcgccgctggctgggacgcccaccggtttctatacgcctgcacgcaagtcgtgagcgc
tacggcttgcccgcttatcaggggcatcatgccctggtcgatgcgctggccaccgcagag
ctgctgcaggcccaaattgccacccactatcgacccgacacgcccttgaaagatatgtgg
tgttga

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