Vreelandella sp. F11: ACFIOZ_17200
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Entry
ACFIOZ_17200 CDS
T11172
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vre Vreelandella sp. F11
Pathway
vre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACFIOZ_17200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_17200
Enzymes [BR:
vre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACFIOZ_17200
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACFIOZ_17200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
HypA
nSTAND3
TrwB_AAD_bind
DUF6204
AAA_19
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XHN39945
LinkDB
All DBs
Position
3748335..3750533
Genome browser
AA seq
732 aa
AA seq
DB search
MLKVALPSPLRRLFDYLPARKTPPCGWQPGLRVRVPFGRREVVGVVVELADSSDLPRSQL
RAISETLDDAPLPQDWLWLCRFAARYYQHSLGDTLHHAMPARLRQGHPMAGRTQTLWLAK
GEGAEETLSRAPKQAELYALLRQHPHGLPGRAVSAHGFARDQLLALEKKGLATSQEHILT
APTAPNGNLLATPALPLNREQATALAALHEKLDSYHPCLLEGVTGSGKTEVYLQLIEAIA
AKGKQSLVLVPEIGLTPQTLARFRNRFRVPVVALHSGLTDPERLDVWEAAASGRALIIIG
TRSAIFTPLANPGAIIVDEEHDGSYKQHDGLRYHARDLAVARAHYHKIPLLMGSATPSLE
SLHQALSGAYRHLRLTQRPSQHPPAKLELIDLRHQRRQGGLLPGAIKAIKSTLSAGKQVL
IFINRRGFAPTLACHACGWIADCNQCDARMTLHRQPPLLACHHCDSRRALPDACPECGSG
DLRALGSGTERTEETLQTLFPKTTIYRIDRDSTRRKDSFEQVLKEIHRGEPCVLVGTQML
AKGHHLPHVTLVVVVNADGGLYAADFRALEHSAQLLEQVAGRAGRAAHPGRVLVQTLHPD
DPHLGQLAEHGYGALARNMLEERRISQLPPFCFMALLRIESPKEEAALAMAQQAAMALRQ
WLKESGVATRCLGPVPAPMERRQNRYHLHVMLTAHKRSQLHPAVSWLVQWLEANREARKV
RWSIDIDPQTLA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgcttaaagtagcgctgccctcgccgctgcgccgcctgttcgattacctgcccgcccgg
aaaacacctccctgcggttggcagccggggctgcgagtgcgggtgccgtttgggcgacgc
gaagtggttggcgtggtagtcgaactggctgacagcagcgacctgccgcgcagccaactc
cgggcgattagtgaaacgcttgatgatgccccgctaccgcaagattggctatggttatgc
cgctttgccgcccgttactaccagcacagtctgggcgacacccttcaccacgccatgcca
gctcggctacgccaggggcatcccatggcgggacgcacccaaaccctatggctcgccaag
ggcgaaggcgcagaagagacactcagccgagcccccaaacaagccgagctgtatgcgttg
ctgcgccaacaccctcatgggttgcccggccgtgcggttagcgcccacggttttgcccgc
gaccagctattagcgctggagaaaaaaggcctggccacgagtcaggaacacatcctcact
gccccaacggcgcccaacggcaacttactggcaacaccggccctgccccttaatcgcgaa
caggccacggcgctggcagcgctgcacgaaaagctcgatagttatcacccctgcttgctc
gaaggcgtgaccggtagtggtaaaaccgaagtttatcttcaactgattgaagccatcgcc
gccaaaggcaaacagtcactggtactggtgccggaaattggcttaacgccacagacgctt
gcccgctttagaaaccgttttcgggtgcctgtggtggcgctgcactcgggcctaaccgac
ccagagcggctagacgtgtgggaggccgccgccagcggtcgggcgctgattattattggc
acccgctcggcaattttcaccccgctggccaacccaggggcgattattgtcgacgaggag
cacgacggctcctacaagcagcacgacggcttgcgttaccacgcccgggatttagcggtg
gcgagagctcactaccataaaatcccactgctgatgggcagcgccaccccttcgctggag
agtctgcatcaggcgcttagcggcgcctatcgccacctgcgtctgacccagcgccccagc
cagcacccaccggccaagctggagctgatcgacctacgtcaccagcgtcgccagggaggg
ctgcttcctggcgccatcaaggctattaaaagcactttgagcgcaggcaagcaggtgctg
atttttatcaaccggcgcggctttgcaccaacgcttgcctgccacgcctgcggctggatc
gccgattgtaatcagtgcgacgcgcgcatgacgctacaccgccagcctcccttactggct
tgccaccactgcgatagccgccgcgccctgccggatgcctgccccgagtgcggcagcggt
gacctacgcgccctgggtagtggtacagaacgtaccgaagagacgctgcaaacgctgttc
cccaaaaccaccatctaccgcatcgaccgcgacagcacgcggcgaaaagatagctttgag
caggtgcttaaagagatacaccggggtgaaccctgcgtattggtcggcactcaaatgctc
gccaagggccaccatctaccccatgttacgctggtggtggtggtcaatgccgatggcggc
ctctacgccgctgattttcgcgccctggaacacagcgcccaactgctcgaacaggtggcg
ggccgggctggtcgcgccgctcacccaggccgcgtgctggtacaaacgctgcaccccgac
gaccctcatttgggccaactggccgaacatggctatggagcactcgcacgcaatatgctg
gaagagcggcgcatttcccagctgcccccgttctgttttatggcgctgctacgcatcgaa
agtcccaaagaggaggccgctttagccatggcgcaacaagccgccatggctctgcgccag
tggttaaaagagagcggcgtcgccacccgttgcctggggccggtgcccgccccaatggaa
agacgccagaaccgctaccatttacacgttatgctgacagcccataaacgcagccaacta
caccctgccgttagctggctggtgcagtggcttgaagccaaccgcgaggcacgcaaggta
cgctggtcgattgatatcgacccacaaacccttgcttag
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