Vreelandella sp. F11: ACFIOZ_17505
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Entry
ACFIOZ_17505 CDS
T11172
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vre Vreelandella sp. F11
Pathway
vre03030
DNA replication
vre03410
Base excision repair
vre03420
Nucleotide excision repair
vre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFIOZ_17505 (polA)
03410 Base excision repair
ACFIOZ_17505 (polA)
03420 Nucleotide excision repair
ACFIOZ_17505 (polA)
03440 Homologous recombination
ACFIOZ_17505 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vre03032
]
ACFIOZ_17505 (polA)
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_17505 (polA)
Enzymes [BR:
vre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFIOZ_17505 (polA)
DNA replication proteins [BR:
vre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACFIOZ_17505 (polA)
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACFIOZ_17505 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACFIOZ_17505 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
XHN36858
LinkDB
All DBs
Position
complement(3813000..3815783)
Genome browser
AA seq
927 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAVKGVLNMLKRLIKDYPDSPMAVVFD
APGKTFRDEMYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAH
HATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDESGVEEKFGLPPALIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHREQ
AFLSYQLATIKVDCDLPVGLDDLDIAHPDREALVALYKEMEFRQWLGELLEGKDEGVDDV
KGGEPAPASADDNDLESAEPSASGSAREDHVILEQADFERWLDRLQNAERFCFDLETTSL
NYMDAEIVGVGLSLEAGEAAYIPLAHDYLDAPKQLDRKTVLAALKPLLEDSTKTKIGQNL
KYDISVLANYAIAVAGPFADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGKGA
KQLTFNQIALEQAAPYACEDVDITLRLQQALRPQVESEGRLAEVLDSIELPLIQVLSRIE
RNGVAVDAELLHQQSQQLEKRIGELEREAFELAGREFNLGSPKQLGQILFEEQKIPVLKK
TPKGAPSTAEGVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKATGRVHTSYHQ
AVTATGRLSSSDPNLQNIPIRTEEGRKIRQAFIARPGYRIVAADYSQIELRIMAHLSEDK
GLLEAFAEGRDIHTATAAEVFGTSLEKVSGDQRRSAKAINFGLIYGMSAWGLSRQLHIER
NQAQTYIDRYFDRYPGVARYMERIRSQAAEDGFVETVLGRRLYLPEIQSQNRNRRQGAER
TAINAPMQGTAADIIKQAMIDVDGWLAEGEFDALMVMQVHDELVFEVAEKQVEAFIEQVQ
KRMQGAAELKVPLIVEAESGANWDEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgctccgatcgtcctcgtagatggctcctcctacctttaccgtgccttccat
gcgctgccgccgctaacgacctccaatggtcagccgacgggcgcggtgaaaggcgtgttg
aatatgctcaaacggctgatcaaggattaccccgacagccccatggcggtggtatttgac
gcgccgggtaaaaccttccgtgatgagatgtatagcgactataaagctcaccgcccgccc
atgcccgatgacttgcgcagccaaattgcgccgttgcacgcctgcgtcaaagcgttgggc
ctgccgctgctgtgtattgaaggcgttgaagctgacgatgtgattggtacgttggcccac
catgccacccaagcggggcgcgacgcggtgatctccaccggcgataaggacatggcgcag
ttggtcaatgcccatatcacgttggtcaacaccatgaaggatgaaaccctggacgagtca
ggggtagaagagaagtttggcctgccccccgccctgattatcgattttctcgccctgatg
ggggacaaggtcgataacatccccggcgtgcccggcgtgggtgaaaagaccgcgattggc
ctgctgcaaggcatgggcggcggtctggagaccatctacggcgatttagagcgagtaaaa
acgcttactttccggggcgctaaaacgctgcctaaaaagcttgaagagcatcgcgagcag
gcgtttctctcctatcagttggcgaccattaaagtcgattgcgatctgccggtgggcctg
gatgatttggatattgcccatccagatcgcgaagcgctggtggcgctgtataaagagatg
gagttccgccagtggctgggcgagctgctggaaggcaaggacgaaggcgtggatgacgta
aaaggcggcgagccagcacccgccagcgctgacgataacgatctcgaaagcgcggagcca
tctgccagtgggagtgctcgagaagatcacgtcattcttgaacaggcagactttgagcgc
tggctggataggctacaaaacgccgaacgcttctgctttgacttggagaccaccagcctc
aactatatggatgcagaaatcgtcggcgtcggcttgtcgctggaagcgggggaggcggcc
tacatcccgcttgcccacgactacctggatgcgcctaagcagcttgaccgcaaaacagtg
ctggcggcactaaagccgctgctggaagactcgaccaagaccaagattggccaaaatctg
aagtacgacatttccgtgctggccaactatgcgattgccgtggcgggcccgtttgccgac
accatgctggcttcctatgtgctcaactccaccgctacccgccacgatatggactccctg
gcgctgaagtatctgggcgagaagaccatctccttcgaagagattgctggtaaaggcgcc
aagcaactgacctttaaccagattgccctggagcaagcggcgccttacgcctgcgaagat
gtcgatatcaccctgcggctgcagcaagcgctacgcccacaggtcgaaagcgaagggcgc
ctggcggaggtgctggatagtatcgagctaccgctgatccaggtgctctcgcgcattgag
cgcaatggggtggcggtggatgcggagctgctgcatcaacagagccagcagttagaaaag
cgaattggcgaactagagcgcgaggcgtttgaactcgccgggcgcgaatttaacctgggg
tcgcccaagcagctggggcaaattctgtttgaagagcagaaaattcccgtgctcaagaaa
acccctaaaggcgccccctctaccgcggaaggcgtactagaagagctggcgctggattac
ccgctgcccaaggtgattatgcagcatcgggggctggccaagctgaagtccacttatacc
gataaattgccgcggctgctcaataaagccactggccgggtacataccagctatcaccag
gcggttaccgccaccgggcggctgtcgtcatcagaccccaacttacagaacatccccatt
cgtactgaagaggggcgcaagattcgccaggcgtttattgcccgccctggctatcgcatt
gtcgccgccgactactcgcagatcgaactgcgcattatggcgcacctttccgaagataaa
ggcctgctcgaagcctttgccgaagggcgcgatatccacactgccaccgcagcggaagtc
ttcggcacctcccttgagaaggtctctggcgatcagcggcgcagcgccaaagcgattaac
ttcggcttgatctacggcatgagtgcctgggggctgtcgcgccaactgcatatcgagcgt
aaccaagcgcaaacttatattgaccgctacttcgatcgctaccctggcgtggcccgctat
atggagcgcattcgctcccaggcggcggaagatggcttcgtcgaaactgtattagggcgg
cggctctacctgccggaaattcagtcgcaaaatcgcaaccgtcgccaaggcgccgagcgg
accgccattaatgcgccgatgcagggcactgccgccgacattatcaagcaggcgatgatc
gacgtggatgggtggctggcagaaggcgagttcgacgcgctaatggtcatgcaggtgcac
gatgaactggtgtttgaggtcgccgagaagcaggtcgaggcgtttatcgagcaggtgcaa
aaacgcatgcagggcgcggctgagctaaaagtgccgctgattgtagaagcggagagcggc
gctaactgggatgaggcgcattaa
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