Vreelandella sp. F11: ACFIOZ_18495
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Entry
ACFIOZ_18495 CDS
T11172
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vre Vreelandella sp. F11
Pathway
vre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFIOZ_18495 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vre03019
]
ACFIOZ_18495 (recQ)
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_18495 (recQ)
Enzymes [BR:
vre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACFIOZ_18495 (recQ)
Messenger RNA biogenesis [BR:
vre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACFIOZ_18495 (recQ)
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACFIOZ_18495 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HTH_20
GerE
Sigma70_r4_2
HTH_23
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
XHN37045
LinkDB
All DBs
Position
4037512..4039644
Genome browser
AA seq
710 aa
AA seq
DB search
MHGDTHPEALKVLQAVFGYDSFRGPQQAIIEHVMAGGDALVLMPTGGGKSLCYQIPALLR
EGTAIVVSPLIALMQDQVAALQQNGVRAAYLNSSLDYHEAVEVENRLRAGELDLLYVAPE
RLATARMQVLLEQTKIALFAIDEAHCVSQWGHDFRPEYRQLSHLHQRFPQVPRIALTATA
DVPTRGDIMEHLQLQEAALYNSGFDRPNIRYHIAENQGNAKEQLLRFIREHHDGEAGIVY
CLSRRKVEETAAWLERQGLTALPYHAGLPPEQRQHHQTRFLREDGVVVVATIAFGMGIDK
PDVRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVITLRQMQQDSSAADQQK
RIEQQKLDAMLGLCEIISCRRQALLHYFGDHLNSPCGNCDNCLTPPETWEATVAAQKALS
CVYRTEQRFGVTYLVDVLLGKHNERITRFGHDRISTFGIGKELSANEWKALFRQLIASGY
LSVDMEGHGGIQLTANAKPVLRGEHTLTLRKPSKTKATRRGSKAGSTTLPHGELWEALRQ
HRRELAAAQGVPAYVIFHDATLAEMVEQKPQSLAALGAISGIGARKLEDYGEGFLDVILA
HGETHHDTPLAGSSALESAALLRQGLTPEEIAQQRNLAANTVYRHLGDVIQSGDLALEEV
VNLDPATLEQIRATFAQYPDQGLKVVFEALEGRIDYPILHCVQASMAAKG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgacacccacccggaagccctcaaggtgctgcaggcggtatttggctacgac
agctttcgcggcccccagcaggcgatcatcgagcatgtaatggctgggggggatgcgctg
gtactgatgcccaccggcggtggcaagtcgctgtgctatcagatcccggcactcttgcgc
gaaggcaccgcgattgtggtatcgccgctgatcgcgctgatgcaggatcaggtggcggca
cttcagcaaaacggggtcagggcggcctaccttaactccagtcttgattaccatgaggcg
gtcgaagtggaaaaccgcctgcgagcgggcgagctggatcttttatatgtggcgccggaa
cggctggccacggcgcgtatgcaggtgttgctggagcagaccaagattgcgctgttcgcc
attgatgaagcccactgtgtttcccagtggggccacgattttcgccccgagtatcgccag
ctctcccatctgcatcagcgctttccccaggtgccgcgcattgccctaaccgccaccgcc
gatgtgcccacccgaggcgatatcatggagcatctgcagctccaggaggcggcgctttac
aacagcggctttgaccggcccaacatccgctaccatatcgccgaaaatcagggtaacgcc
aaggaacagctgctgcgctttatccgcgagcaccacgacggcgaggcgggtatcgtctac
tgcctttcccggcgcaaggtggaggagaccgccgcctggctggaacgtcaggggctaacc
gcgctgccctaccacgccgggctgccccccgagcagcgccagcaccaccagacccgtttt
ctgcgtgaggatggtgtggtcgtggtggccaccatcgcctttggcatgggcatcgacaaa
ccggacgtgcgctttgtcgcccaccttaacctgcccaagagcattgaagcctactaccag
gaaaccggccgcgccgggcgcgatggactgcccgccgatgcctggatggcctacgggctt
caggacgtgatcacgctgcgtcagatgcagcaggactccagcgctgccgaccagcaaaag
cgcattgagcagcagaaactcgacgccatgctggggctttgcgaaatcatcagctgccgc
cgccaggcgctgcttcattactttggcgatcatctgaattcgccctgcggcaattgcgat
aactgcctgaccccgcccgagacctgggaggccaccgtggcggcgcagaaggcgctgtcg
tgcgtctaccgcaccgagcagcgcttcggcgtgacctatctggtggatgtactactaggt
aaacataacgagcggatcacccgttttggccacgaccgcataagcaccttcggtattggc
aaagaactctcggctaacgagtggaaagcgctctttcgccagctgattgccagcggctat
ttaagtgtggatatggagggccacggcggcattcagctcactgccaacgccaagccagtg
ctgcgcggcgaacacacgcttaccctgcgcaaaccaagcaagaccaaggccacccgtcgg
ggcagcaaagcgggctcgaccacgctgcctcatggggagctatgggaagccctgcgccag
caccgtcgagagctggccgcggcccagggcgtgcctgcctatgtgatcttccacgacgct
accctggccgaaatggtcgaacagaaaccccagagtctggcggcactgggcgcgatctcg
ggtattggtgcacgtaagctggaagattacggcgagggttttctggacgttatcctggcg
catggggaaacccatcacgataccccactcgcgggcagtagcgccttggagtccgcagca
ctgctgcgccagggattaacgccagaggaaatcgctcagcagcgcaaccttgcagccaac
actgtttaccgccatttgggtgatgtgattcaaagtggcgacctggcgcttgaagaggtg
gtcaacctggatcccgcgaccttagaacaaatccgcgcaacctttgcgcaatacccagat
caagggctgaaagtggtgttcgaagcgctggaggggcgcattgattaccctattctgcac
tgtgtgcaggcgtccatggccgcaaagggttaa
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