Vreelandella sp. F11: ACFIOZ_21570
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Entry
ACFIOZ_21570 CDS
T11172
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vre Vreelandella sp. F11
Pathway
vre03420
Nucleotide excision repair
vre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACFIOZ_21570 (uvrD)
03430 Mismatch repair
ACFIOZ_21570 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vre03400
]
ACFIOZ_21570 (uvrD)
Enzymes [BR:
vre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACFIOZ_21570 (uvrD)
DNA repair and recombination proteins [BR:
vre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACFIOZ_21570 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACFIOZ_21570 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XHN37645
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Position
4721729..4723927
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AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNSAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAKEMRTRLEALLSISMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRLLKDYSIDDERYPPRQVQHFISGCKEEGLRPHQVNVDGDAYMGQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDNPALLKHYQERFGHVLVDEFQDTNTLQYAWLKLLTGM
KTPMTAVGDDDQSIYGWRGAKVENISRFEQEFPQTHTVRLEQNYRSTSAILEAANTLISH
NSERMGKNLWTDGIEGEPISIYAGFNDLEEARYIVDTIKEKVDEGFNRRDIAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLMLNRDDDASLERVINVPTRGIG
TRTVEIVRLRAREQGIPLWQALHDAINDGTLKGRAANAVQTFANLIEQLDNDASGMALHE
IIDHVTVHTGLIEHHKSERGEKGQARVENLEELVTAARAFTQGDVFEAPEAGEGMAALEA
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSLEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRTSFAQQSVEGSDEMPSLHVGQGVEHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLTPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgattctcgatcagctcaactccgcccagcgcgaagcagtgagc
gccccccaaggtaatctgttggtgctcgcaggcgcaggttctggcaaaacccgtgtgctg
gtgcatcgcatcgcctggctgatgcaggcggaaggattgtcgccctacgcgctgctggcc
gtcacctttaccaacaaagccgccaaggagatgcgcacccgccttgaggcgctactgagc
atctcaatgcgccatgtctgggtgggcacctttcactctatcgcccaccggctgctgcgt
acccactggcaggacgcccgactgccgcaacacttccagatcatcgattccgacgatcag
ctccgcctggtcaaacggctgctaaaagattactccatcgacgacgaacgctatccgccc
cgccaggtgcagcactttatctccggctgcaaagaggagggattacgcccgcaccaggtc
aatgtggatggcgatgcctacatgggccagatggtcgagctctacgagcgctaccagctc
acctgtgagcgcggcggtctggtcgattttggcgagctgctgctaagaagcctggagcta
ctgcgtgataaccccgcgctgttgaaacattatcaggagcgctttggccacgtgctggtg
gatgagtttcaggataccaataccctgcaatacgcctggctaaagctacttaccggcatg
aagacaccgatgaccgccgtgggtgatgatgaccagtcgatctacggctggcgcggcgcc
aaagtagagaacatcagccgctttgagcaggagtttccgcagacccacaccgtacgcctg
gagcagaactatcgctccaccagcgccattctggaagcggccaatacgctgatcagccac
aacagcgagcgcatgggtaaaaacctgtggactgatggcatcgaaggcgagccgatctcg
atctatgccgggtttaacgacctggaagaagcccgttatatcgtcgacactatcaaagag
aaggtcgatgaaggcttcaaccgacgggatattgccattctctaccgctcaaacgcccag
tcacgactgctggaagagacgctgattcgccaaggcatgccctaccgtatttacggcggc
caccgcttctatgagcgcttggaaatcaaaaatgccctggcctacctgcgcctgatgctc
aaccgcgatgacgacgcttcactagagcgggtgatcaatgtgcccacccgtggcatcggc
acacgcacggtagagattgttcgcctgcgcgcccgtgaacaaggcattccgctatggcag
gcgctccacgatgcgattaacgacggcaccttgaaaggccgcgcagccaatgccgtgcaa
accttcgccaacctgatcgagcagctcgataacgatgcttccggcatggcactgcacgag
attatcgaccacgtcacagtgcataccggtttgatcgagcaccacaaaagtgagcgcggc
gagaaaggccaggcgcgggtggaaaacctggaagagctggtcactgccgcccgcgccttt
acccagggcgatgtgtttgaagcacctgaggcgggcgaaggcatggcggcgttggaagcg
tttctctccgaagccgcccttaacgctggcgaccacgaagccgaggagtttgaagatagc
gtgcagttgatgacgctgcactccgccaaaggtctggagttcccggtggtgtttattgcc
ggtgtggaagagggactgtttccgcacaagatgtcccttgaagagccgggcaggctcgaa
gaggagcggcggctctgctacgtcggcgttacccgcgccatgcagaagctctacctcacc
cacgccgaaacccgccgcttgcacggcaaagaggtatttccacgcccatcgcgctttttg
cgcgagctgccaccacacctgctcgaagaggttcgcctgcgcgggcatatttcccgcccg
gttaccgcctcgcgtacctcctttgctcagcaaagcgtcgagggcagcgacgaaatgcct
agcctccatgtcggccagggagttgagcaccccgtatttggcgaaggaattatccttaac
gcggaaggtgaaggtgcccgcgcccgtgtgcaggtcagctttgaaggcgaaggggtcaaa
tggctggtgctcggctttgccaaactaacgccactttaa
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