Veillonella rogosae: OKW85_05230
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Entry
OKW85_05230 CDS
T08601
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vrg
Veillonella rogosae
Pathway
vrg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OKW85_05230 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrg03400
]
OKW85_05230 (priA)
Enzymes [BR:
vrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OKW85_05230 (priA)
DNA repair and recombination proteins [BR:
vrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OKW85_05230 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
PIF1
AAA_19
DAP3
nSTAND_NTPase5
Zn_ribbon_ISL3
nSTAND6
T2SSE
AAA_22
PhoH
SLFN-g3_helicase
Zn_ribbon_6
IBR_1
Motif
Other DBs
NCBI-ProteinID:
UZG50115
UniProt:
A0AA47AED4
LinkDB
All DBs
Position
complement(1159764..1161965)
Genome browser
AA seq
733 aa
AA seq
DB search
MKGYESMRVAQVIINRPAKQLHKPLSYLMPEKFGNVLPGTRVLIPLGHSREEGILIGYKE
LVEPPEFTLRNIVQVLDSEPWFTPEMMDTARRLNEYYLFSYGDALRLFTVNKTLKSYEAP
KEEWLVVMPDFSIDQFSERKKKQRELAQYLLEVGGASKALLLAKGYSRMVIKQVSEAKGI
TIESRFKATKTTFTELLTEEVNIPLTQAQQAVYEPIQEAMSSHEHKTFLLHGVTGSGKTQ
LYLRATAKCISQDKTAIILVPEIILTDQIVRRFVETFGDEVVVFHSKLTVQQRNNNWERL
RRKDSHIIIGARSAVFAPAEDIGLIVVDEEHDTSYKQEDMVRYHARNVALWRGEAHNCPV
ILGSATPAITSYYKAKQGEYHLLELPHRIFEQPMPKVTIVDMKEEIFHGNYSVFSDAMSR
LIQKTLHEHNQMIILLNRRGYSTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHYCEHH
EPIPTVCPKCNSKRIKFFGSGTQKVEEELRRHFKSARIARLDQDVTKNKQMAEDILHDFG
AHKYDILLGTQMVSKGHDFKDVTAVGILTADSVLNIPVYTASERTFDLLTQTSGRAGRGD
KTGSVVIQTYNPLNYAIIKSKAHDYVGFYHEEIQNRKALGYPPFREMIHMVVRHQDMETL
ESIANRIVDDLEAHKGDEDILINGPYEATIKKVRDMYRLAIMIRGTDLTNLKEYIYNSWI
FTQEGLLIDVDPV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggatatgagtctatgcgtgtagcacaagttattattaacagacctgccaaacaa
cttcataaaccattgagctatctaatgcctgaaaagtttggtaacgtcctacctggtact
cgcgtactcattcctttaggtcatagtcgtgaagaagggatcctcattggttataaagaa
ttagttgagccacctgagttcacgttgcgaaatatagtgcaagtattagatagtgagcct
tggtttacaccagaaatgatggatacggcacgacgtttaaatgagtattatcttttttct
tatggtgatgcactacgattatttacagtaaataaaacattgaaatcctatgaggcacca
aaagaagaatggcttgtagttatgcctgatttttcaatagatcaatttagtgaacgaaaa
aagaaacaacgtgaattagcgcaatacttacttgaagtcggtggtgcgtccaaggcacta
ttattagctaaaggctattctcgcatggtcataaagcaagtaagtgaagctaaagggatt
actattgaatctcgttttaaagccacaaaaacgacctttacggagcttttaacggaagag
gtgaatattcctcttactcaagctcaacaagccgtatatgagcctatacaagaggctatg
agtagtcatgagcataaaaccttcttacttcatggtgtaaccggtagcggtaaaactcaa
ttatatttacgagctacagcaaaatgtattagtcaagataagactgctattatcttggtg
cctgaaattatattgaccgatcaaattgtgcgacgatttgtggaaacctttggcgatgaa
gttgtcgtattccatagtaaattgacggtacaacaacgcaataataattgggaacggttg
cgtcgtaaggatagtcatattattattggtgcccgttcggctgtgtttgctcctgctgag
gatatcggtcttattgttgtggatgaagaacatgatacctcttataaacaagaagatatg
gttcgataccatgcccgtaatgttgccttatggcgtggtgaagcacataattgtcctgtg
attttaggttctgctacaccagctattacttcttactataaagccaagcaaggcgagtat
catttgcttgagctacctcatcgtatttttgaacaacctatgccaaaggtaactattgtt
gatatgaaggaagaaatcttccatggcaattattctgttttttctgacgctatgagtcgg
ttgattcagaaaacattacatgaacataatcaaatgattattctattgaacagacgtggt
tatagtacctttgtaatgtgtcgtgattgcggggaaactattatgtgccctcattgtgat
gtagcgatggtctatcatcaagcaggtgaggaattgcgctgtcactattgtgaacatcat
gaaccgattcctacggtttgtccaaagtgtaatagtaaacgcattaaattctttggctca
ggtacacaaaaggtagaggaagagttgcgacgtcattttaaatcggcccgcattgcccgc
cttgatcaagacgtaactaaaaacaaacaaatggcagaggatatcttacatgacttcgga
gctcataaatacgatattttattgggaacccaaatggtatctaaaggtcatgactttaaa
gatgtaacagcggttggtattttaacagctgattcggttttaaatattcctgtgtatact
gcttctgaaagaacttttgatttgcttacccaaacctctgggcgtgctggtcgaggggat
aaaacaggcagtgttgtaatacaaacatataatccgttaaattatgctataataaagagt
aaggctcatgattatgtaggcttttaccatgaagaaattcaaaatagaaaagctttagga
tatcctccatttagagaaatgattcacatggtagtgcgtcatcaagatatggagacctta
gagtccattgcaaatcgaatagtagatgatttggaggctcataaaggggatgaagatatt
cttattaatggtccttacgaagcaactataaaaaaggtacgggacatgtatcgcttagcg
attatgatccgtggtactgatttaacgaatttgaaagaatatatatataactcatggatt
ttcacgcaagaagggcttctgattgacgtggatcctgtgtag
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