Veillonella rogosae: OKW85_05705
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Entry
OKW85_05705 CDS
T08601
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vrg
Veillonella rogosae
Pathway
vrg00541
Biosynthesis of various nucleotide sugars
vrg01100
Metabolic pathways
vrg01250
Biosynthesis of nucleotide sugars
Module
vrg_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vrg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OKW85_05705 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vrg01005
]
OKW85_05705 (rfaD)
Enzymes [BR:
vrg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
OKW85_05705 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vrg01005
]
Core region
OKW85_05705 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
CUB_M02D8_5_3rd
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UZG50204
UniProt:
A0AA47AEW7
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Position
complement(1255249..1256214)
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AA seq
321 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDRGRTDILIVDDLTDGRKIRNIQNLEFLDYIDCDDFDCAI
ADGTFDVGPIEIVFHEGACADTMEYNGKYMMKNNYEGSKNLFHYCQDRRIPFIYASSAST
YGNGTNGFVEKPEAEEALNPYAYSKLLFDRYVRKYEGEYTAQVVGLRYFNVYGPNEAHKD
KMASLVRQMFYKNKETGIINLFEGTDGYENGGQTRDFIYVKDVVNVNFYFWEHPEISGTF
NCGTGNAHSFNQFMQAVIDYNGHGKIEYVPFPEVLKGKYQSFTEADTTKLLASGYDKGFH
KMEDAVKEYCELLDNNEGYLR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacaggtggtgctggttttatcggcagtaatattgtgaaagcactaaat
gaccgtggtcgtacagatattcttatcgttgatgatcttacagatggtcgcaaaattcgc
aatattcaaaatctagaattcttagattacatcgattgtgatgattttgattgtgctatc
gctgacggtacattcgatgtgggccctattgaaatcgtattccacgaaggcgcttgtgca
gacacaatggaatataatggcaaatacatgatgaagaacaactatgaaggttctaaaaat
ctattccattattgccaagaccgtcgtattccatttatctatgcatcctctgcatctact
tatggcaatggtactaatggtttcgtagaaaaaccagaagccgaagaagccctcaatcca
tatgcgtactctaaattgttattcgaccgttatgtgcgtaagtatgaaggtgaatatact
gctcaagtagtaggtttacgctattttaacgtgtacggtcctaacgaagcacataaagat
aaaatggcttccttagttcgccaaatgttctacaaaaataaagaaactggtattatcaat
ctatttgaaggtacagatggctacgaaaatggtggtcaaactcgtgactttatttatgta
aaagacgtagttaatgtaaacttctacttctgggagcatccagaaatttctggtactttt
aactgcggtactggtaatgctcatagctttaatcaattcatgcaagctgttatcgactat
aacggccacggcaagattgaatacgtgccattcccagaggtgttaaaaggcaaatatcaa
agctttacagaggctgatacgactaaattattggcttctggctatgataaaggattccac
aaaatggaagatgccgttaaagaatattgtgagctattagataataacgaaggatattta
cgttaa
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