Veillonella rogosae: OKW85_06915
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Entry
OKW85_06915 CDS
T08601
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vrg
Veillonella rogosae
Pathway
vrg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vrg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OKW85_06915 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vrg01007
]
OKW85_06915 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vrg03016
]
OKW85_06915 (serS)
Enzymes [BR:
vrg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
OKW85_06915 (serS)
Amino acid related enzymes [BR:
vrg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
OKW85_06915 (serS)
Transfer RNA biogenesis [BR:
vrg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OKW85_06915 (serS)
Prokaryotic type
OKW85_06915 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF1759
Med4
CCDC113_CCDC96_CC
JIP_LZII
Pup_ligase
KIF21A
TMPIT
BLOC1_2
PCRF
FlgK_D1
Cauli_AT
V-SNARE
Sos7
KIF9
DUF1664
ZapB
DUF724
Motif
Other DBs
NCBI-ProteinID:
UZG50436
UniProt:
A0AA46X5X5
LinkDB
All DBs
Position
complement(1518858..1520138)
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AA seq
426 aa
AA seq
DB search
MLDLKFVRENIDLVQQNLDNRHTTGDLETFVSAYDERRQLIGKVEELKALRNSVTEEISQ
LKRNKENADDKIAEMKKVGDEIAELDNRIREVETNLRDAALMLPNMCDPSVPVGADEEEN
VEQRKWGEPRQFDFEVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALINFM
VDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVADTEYFLIPTAEVTLTNYHG
GEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKELET
LTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGKYREISSCSNMTDFQA
RRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENCQQADGSVVIPKVLVPYMGGVE
VITPAK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaatttgtccgagaaaatattgatttagtgcaacaaaacttagataac
cgtcacacaacaggcgatttggaaacctttgtatccgcttatgatgaacgtcgtcagttg
attggtaaggtagaagagttaaaagcgcttcgcaattccgtaactgaagaaattagccaa
ttaaaacgcaataaagaaaatgcggatgataaaatcgcagaaatgaaaaaagtaggcgac
gaaattgctgagcttgataaccgtattcgggaagtagaaactaatttgcgtgatgcagcg
ttaatgttgccaaatatgtgtgatccatctgttcctgttggtgctgatgaagaggagaat
gtagagcaacgcaaatggggcgaaccacgtcaatttgattttgaagtgcaagctcattgg
gatttaggtgaaagtcttgatattctagattttaaccgcgctggcaaaatgagtggtgcc
cgtttcactgtatataaaggtttaggtgctcgtttagaacgtgccttgatcaatttcatg
gttgatcttcatgtagacaaacacggctatactgaaatgatgactccatacatggtaact
cgtgaaacattgactggtactggtcaattacctaaatttgctgaagatatgtaccatgta
gcggatacagaatatttcttgattcctactgctgaggttacattgactaactaccatggt
ggtgaaatcttgagcgaagaggaattacctaaatactacactgcattcactgcatgtttc
cgtgctgaagcaggttctgcaggtcgcgatactcgtggtcttattcgtcaacatcaattc
aacaaagttgaaatggtaaaattagctaaaccggaagactctttcaaagaattagaaact
ttgacagataatgcagaagaagtattacgtttattagaattaccattccgtgttatcact
ctttgtacaggtgatatgggctttggctctgctaaaacatatgacgtagaggtatggatg
ccagcacaaggcaagtacagagaaatttcttcttgctccaatatgacagacttccaagca
cgtcgtgctaatattaaattccgtcgtggtcctaaaggcaaacctgaatttgttcataca
ttaaatggttctggtcttgcggtgggccgtacagtggcagctatcttagaaaattgccaa
caagctgatggttccgtagtaattccaaaggttttggtaccttatatgggtggcgttgaa
gtcattacacctgcgaaataa
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