Veillonella rogosae: OKW85_07260
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Entry
OKW85_07260 CDS
T08601
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vrg
Veillonella rogosae
Pathway
vrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OKW85_07260 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vrg03019
]
OKW85_07260 (recQ)
03400 DNA repair and recombination proteins [BR:
vrg03400
]
OKW85_07260 (recQ)
Enzymes [BR:
vrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OKW85_07260 (recQ)
Messenger RNA biogenesis [BR:
vrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OKW85_07260 (recQ)
DNA repair and recombination proteins [BR:
vrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OKW85_07260 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
NMDAR2_C
Motif
Other DBs
NCBI-ProteinID:
UZG50495
UniProt:
A0AA46X2C5
LinkDB
All DBs
Position
complement(1594625..1596490)
Genome browser
AA seq
621 aa
AA seq
DB search
MDQQGTIKQENLKQPVVTKQQALRMLETYFGYTSFRPAQEAPIASLLRNEDVIGIMPTGA
GKSICFQIPALCKAGLTIVFSPLISLMKDQVDGLLVQNIPAALINSTLTQAEFNKTMYEV
RSGKIKLLYIAPERLGSNFFCNVLRALPIAQVIVDEAHCISEWGHDFRPSYRLIGEWLNS
LPKRPIVGAFTATATKYVENDIKKLLGLDNANVYVTGFDRPNLSFSVIRTPKRMDYVVHY
VRQHDNENGIIYCATRKDVDRVYENLTRAGIKVGHYHGGLSDEVRREMQNAYADDKLQVM
VATNAFGMGIDKSNVRYVLHYQMPRNMESYYQEAGRAGRDGAPAECILLYSGQDVQVHKY
LIEQSIETPERQEVELRKLQSMIDYCFCSNCLRKYMLNYFGESTVWTTCDNCSSCKGSGD
KVNVTKEAKAIFRAIMGTDERYGASMITSIVRGDRTDRIMRAGHDALPVFGLLSNVDEKS
IKGLIQQFVASGYLRSSSGKYPVLSLTAGAEEVLAGHKEVEEIRQHVSVPSRTSRSTSTP
SRGKSSFGSGGLFEHLRQHRKRLAEEAGLRPYLIFPDTVLIDLANLRPTTLGEFGNVKGV
GEAKLKKYGLSFLQAIAEYKR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaggggacaataaaacaagaaaatctaaaacaaccagttgtgacaaaacaa
caagcactacgcatgttagaaacttactttgggtatacctcctttagaccggctcaagag
gctcctattgcctccttattacgcaatgaagatgtaattggtattatgcctacaggggca
ggcaagtccatttgttttcagatccctgcactttgcaaggcggggctaactatcgtgttc
tctccactgatttctcttatgaaagaccaagtagatggtctgttagtgcagaacattcca
gcggcgctcatcaatagtacgcttacgcaagcggagtttaataaaacgatgtacgaagtg
cgtagtggtaagatcaaactcttatatattgcgccggagcgactaggttctaatttcttt
tgtaatgtgctaagagcgttgcctatagctcaagtcattgtggatgaggctcattgtatc
tccgagtggggccatgactttagaccgtcctatcgcctcatcggtgagtggctcaactca
ctgcctaaaaggcctattgtaggggctttcacagcgacggctacgaaatatgtagaaaat
gatatcaagaaactattaggtttagataatgcgaatgtgtacgtaacgggctttgatcgg
cctaatttatccttctctgtcatccgtacaccaaagcgcatggattatgtggttcactat
gtgcgccaacatgataacgaaaatggtattatctattgtgcgacgcgtaaggatgtagat
cgagtgtatgaaaatctaacccgtgcaggcattaaggtgggccattatcatggggggctc
agcgatgaggtgcgccgtgagatgcaaaatgcttatgcagatgataaactgcaggtcatg
gtggctactaatgcttttgggatgggcatcgataagagtaatgtgcgctatgtgttgcat
taccaaatgccacgcaacatggagtcctactatcaagaggcgggccgtgcaggtcgcgat
ggagcacctgcagaatgtatcttgctctacagtgggcaggatgtacaagttcataaatat
ttgattgaacagtccatcgagacgcctgagcgacaagaggtagagcttcgtaaattacag
tctatgattgactactgtttctgcagtaattgcttacgtaaatatatgcttaactatttt
ggtgaaagcaccgtttggactacttgtgataattgtagttcttgtaaaggctccggtgat
aaggtaaatgtaacaaaagaggcgaaggctatcttccgtgctattatggggaccgatgag
cgctatggtgcctctatgattacctctatagtacgtggtgatcgaactgaccgcattatg
cgggcaggccacgatgcactgcctgtctttggtttgctaagtaatgtagacgagaaatct
attaaagggctcatccaacaatttgtagcttctgggtacttgcgtagttcttcaggtaag
tatcctgtgctatccttgacggctggcgctgaggaggtcctcgctgggcataaagaggtg
gaggaaatcaggcaacatgtgtctgtaccatctcgaactagtcggtctacgtctacccca
tcacgaggcaaatctagttttgggtcaggtggtttatttgaacatttacgacaacatcgc
aagcgcttagccgaagaggcagggcttcgaccatatcttatcttccctgatacagtactt
attgacctagccaatttacgacccacaacattaggtgaatttggcaatgttaagggtgta
ggggaagcaaaattgaaaaaatatggcctcagctttttacaggccattgcagaatataag
agataa
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