Veillonella rogosae: OKW85_08700
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Entry
OKW85_08700 CDS
T08601
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vrg
Veillonella rogosae
Pathway
vrg03420
Nucleotide excision repair
vrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OKW85_08700
03430 Mismatch repair
OKW85_08700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vrg03400
]
OKW85_08700
Enzymes [BR:
vrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OKW85_08700
DNA repair and recombination proteins [BR:
vrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OKW85_08700
MMR (mismatch excision repair)
Other MMR factors
OKW85_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
DEDDh_C
AAA_30
ResIII
Viral_helicase1
DEAD
DNA_pol_A_exo1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UZG50757
UniProt:
A0AA46X2N3
LinkDB
All DBs
Position
complement(1877221..1879809)
Genome browser
AA seq
862 aa
AA seq
DB search
MLINREQQRVIDEVEQNILLLASAGTGKTNTLAYRVAHLIEGGYAKAENILCMTFTNKAA
NEMKDRIQSLVGSPAKAVEVSTFHSFCFFVLQQEGKRNETLYTDVTIFDEEDCKELSEPY
RPGKLREMSFANIIGMVKEYRSLYGFYSDDLVGDYKRTIDRLQKEQRNAIEQQFSSFGNV
LYSELHDFLNHGHEWIAVYDESLASVHGLDFTDLICGVHRLFQDPVVRERWRSRYSYISV
DEMQDTGILEYKVLEMLWEGNHVLLCGDYFQTIYEWRGSAPFRLLKQFDADFKPLKIIFY
ENYRSNWTLFTMAFKTLQNMFPDLVGSIYTELPRANSERKGKPVLIKGCKNSYLEGRYIY
EAICALPKDANIGVLVRDNKKAQRLSDSFERLNNEKPEDERRHFMIIDEFKFFRRQEIKD
VMAYFKLLMNPNDSVSAKRIIKRYVAGIGDARIAAIESPETRQVGLKLTDFMDMPIFEAE
PYAKLVSGLENHEVVVYDVESTGTDTSQDRIIQIAAIRIDENGQVLETFERFINPGVPVG
QSEEVHGFSDAYLQEHGEEPPIVLQAFKEFSKNAIIVGHNVNYDVTIFTNELARYNIGNP
EFKAIYDTLDIYRRFYPNLPNHKLGFLASEFPINHEPTHNAMDDILATAQLLIYAVKENI
VPTTTGRMVAINKYKAAFTNIASQMATLRRKAYTELPTKLLAYIMNQMGVLEYYKSHGEA
AKVEHIRDLYRIMEKLDAAYEGPAGLARLNQILQMAALTAGEPAQQVRNKDRIPIITIHQ
AKGSEFDHVFLAGLNEGTFPSPLAIAEGREDEEKRLFYVAITRPKQELTITFEQTNIRGR
AVQPSSLLNYMPRDNELVERRY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcaatcgtgaacaacaacgcgttattgatgaagttgaacagaatatcctcttg
ttagcgtccgctgggacgggaaaaacgaatacacttgcttatcgggtggctcacctcatc
gagggcggctatgcgaaggcggagaatatcttgtgcatgacctttacgaacaaggcggca
aacgagatgaaagaccgcattcaatcgctcgtaggcagtcctgcaaaggctgtggaggtt
agtacattccacagcttttgctttttcgtactccaacaagagggcaagcgcaatgaaacc
ttatatacagacgtaaccatctttgacgaagaggattgtaaggaattgtctgaaccgtat
cgtccaggtaaattgcgagaaatgtcctttgccaacatcatcggcatggtaaaagaatat
cgttccttatatgggttttattctgatgatctcgtaggcgattataaacgaacgattgac
cgtttgcagaaggaacaacgtaacgcaattgagcagcagttttctagctttggcaatgtg
ctctacagtgaactccatgacttcttgaaccatggtcacgaatggattgctgtctatgat
gaaagcttagcctctgtacatggtctagattttacggaccttatctgtggtgttcatcgt
ctattccaagatcccgtagttcgggagcgttggcgcagtcgttatagctatatctctgta
gatgaaatgcaagatacgggcattctagagtacaaggttctagaaatgctgtgggaaggt
aatcacgtcctattatgtggggactatttccaaaccatttacgaatggcgtggatctgct
ccattccgcttgctcaagcaatttgatgcggactttaagcctttaaaaattattttctat
gaaaactaccgctctaactggactctctttacgatggctttcaaaacattgcagaatatg
ttccctgatctggtaggttctatctatactgaattgcctcgtgccaatagtgaaagaaag
ggcaaacctgttctcataaaaggctgtaaaaatagctatcttgagggcagatatatctat
gaagctatctgcgccttgccaaaggatgccaatattggtgttctcgtacgagataataaa
aaagcgcaacggctgagcgactcctttgaacgcctcaacaatgaaaaacctgaagacgaa
cgtcgtcattttatgattattgacgagtttaaattctttagacgtcaagaaatcaaagac
gttatggcttactttaaattgcttatgaacccgaatgactccgtcagcgctaagcgcatt
ataaaacgctatgttgctggtatcggtgacgcgcgtatcgccgctattgaaagccctgag
acgcgtcaagtgggtttaaaattgacggactttatggatatgcctatctttgaagcagag
ccttatgcgaagctcgtcagtggtttagaaaatcatgaggtcgtggtgtatgacgtagaa
agcactggtaccgatacgtctcaggatcgtattattcaaattgcggccatccgcatcgat
gaaaatgggcaagtcctagaaacctttgaacgctttatcaaccccggcgtacctgtagga
caatccgaagaggtacacggcttctccgatgcgtatttacaggaacacggcgaagagcca
cctatagtgctacaagcctttaaggaattctccaagaatgccattatcgtaggccacaat
gtaaactacgatgtgaccatctttactaatgaattagcacgctataatataggtaatcca
gagtttaaggctatctatgatacactcgatatttaccgtcgtttctatcctaatttgcca
aatcataaactaggcttcttagcatcagagtttcctatcaatcatgagcctacgcacaat
gcgatggacgatatattggccactgcacagcttttaatttatgcagtgaaagaaaatatc
gtgcctacaacgactggtcgtatggtggcaatcaataagtataaggctgcttttaccaat
attgcgtcccaaatggcaacgttacgtagaaaggcctatacggaattgccaacgaagtta
ttggcctatattatgaatcaaatgggtgttctagaatactataaatcccatggggaagca
gcaaaggtagagcatatacgggatctatatcgcattatggaaaaattagatgctgcctat
gaaggcccggctgggttagctcgattaaatcaaatcttgcagatggcggcccttaccgca
ggtgagccagctcaacaggtacgcaacaaagatcgaattcctattattaccatccaccaa
gcaaaggggagcgagtttgaccatgtattcctagcaggcctcaacgaaggcaccttccca
agcccgcttgccattgcagaagggcgtgaagatgaagaaaagcgcttgttctatgtggcc
ataacgcgccctaagcaagagttgactattacctttgaacaaaccaatatacgtggccga
gcggttcaaccaagctcgctactgaactatatgccacgagacaatgaactcgtagaaagg
agatactaa
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