Vitis riparia (riverbank grape): 117903993
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Entry
117903993 CDS
T07274
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10L isoform X1
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vri01003
]
117903993
Glycosyltransferases [BR:
vri01003
]
Polysaccharide
Structural polysaccharide
117903993
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Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
117903993
NCBI-ProteinID:
XP_034672415
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Position
17:20726939..20731497
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AA seq
416 aa
AA seq
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MELCRWVFCVLLLIASSLRVGAEQLRRGQRTERISGSAGDVLEDNPVGRLKVFVYELPSK
YNKKILQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPL
PFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILHLLQR
ATLVQTFGQRNHVCLKEGSITIPPYAPPQKMQSHLIPPDTPRSIFVYFRGLFYDVGNDPE
GGYYARGARAAVWENFKDNPLFDISTEHPMTYYEDMQRAVFCLCPLGWAPWSPRLVEGVI
FGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPNLDTILTSIPPEVILRKQRLLANPS
MKQAMLFPQPAQPGDAFHQILNGLARKLPHDRNIYLKPGEKILNWTAGPVGDLKPW
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagctttgtaggtgggtgttttgtgtgcttttattgattgcctcttctttgagggtt
ggtgctgagcagctccgtcggggtcaacgtactgagcgaatttccggtagcgctggtgac
gtcttggaagacaatccagtgggaaggttgaaagtttttgtttatgaacttccaagtaaa
tacaacaagaagattctgcaaaaggaccccagatgcctcacacatatgtttgcagctgag
atttttatgcatcgattcctcttatctagtcctgttagaaccctcaatcctgaggaagca
gattggttttatacccctgtttacaccacatgtgatctgactccaaatggcctccctttg
cctttcaaatcaccgcggatgatgagaagtgcaatacagcttatctcttcaaactggcct
tattggaatcggacagaaggggctgatcacttttttgtagtgccccatgactttggggcg
tgcttccattaccaagaagagaaagctattgaaagaggaattcttcacttgctccagcgt
gccaccttggttcaaacttttggacaacggaatcatgtttgcttgaaagaaggctcaatc
acaatccctccatatgctcctccacagaaaatgcagtcccacttgatcccgccagacact
cctaggtctatctttgtctacttccgaggattgttctatgatgtaggaaatgacccagaa
ggtggttattatgcaagaggtgcacgggcagctgtgtgggagaattttaaagacaatcca
ctttttgacatctcaacagagcacccaatgacttattatgaggacatgcaacgggctgtg
ttttgtttgtgccccctaggatgggccccatggagtccaagattagttgaaggagtgata
tttgggtgcatccctgtcatcatcgcagatgacattgttttaccctttgctgatgcaatt
ccgtgggaagaaattggggtgtttgtagctgaggaagatgttcccaacttggacacaatt
ctcacatcaatcccacctgaggtaatattgaggaagcagagattacttgccaacccttca
atgaagcaggcaatgttgttcccacaacctgctcaaccaggggatgctttccatcaaatt
ttgaatggacttgcacggaagttgccacatgacaggaacatttacctgaagccaggtgag
aagatcttaaactggactgcaggcccagtgggtgacctgaaaccttggtag
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