Vitis riparia (riverbank grape): 117904239
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Entry
117904239 CDS
T07274
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117904239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117904239
04147 Exosome [BR:
vri04147
]
117904239
04090 CD molecules [BR:
vri04090
]
117904239
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117904239
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117904239
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117904239
CD molecules [BR:
vri04090
]
Proteins
117904239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
RsgA_GTPase
AAA_30
Zeta_toxin
AAA_16
ABC_ATPase
G-alpha
PRK
DUF815
AAA_15
nSTAND1
MeaB
nSTAND3
AAA_25
Vp25_capsid
Motif
Other DBs
NCBI-GeneID:
117904239
NCBI-ProteinID:
XP_034672648
LinkDB
All DBs
Position
17:7998056..8005828
Genome browser
AA seq
1282 aa
AA seq
DB search
MGKLDLETQKDDTLTSKPEGNEKIEKDDGSSTKPEESGKPATPSGSLRSILRYSDWKDMV
LMTLGTFGCVADGLTMSAMMLVISKLMNAYAVTSLSLADIDKYALALLYVALVIGAGSFL
EGFCWARTAERQTSRLRRKYLQAVLRQDVGFFERTHGASMTSQVVSSISTDILVIQGVLS
EKLPNFIMNIAMFITSQMTALYLCWRLAIVAIPALSMLIIPGIVYGKLLSGLGEKLQEAY
AVAGGIVEQAISSIRTVYSYVGEERTVKSYSVALEPTLKLGIKQGLMKGMAIGSIGVTYA
VWALQGWYGSILVTDKGVKGGNVFATGACIIYGGLALGSSFINVKHFTEANAAAALILEM
IERVPSIDSADQQGKTITEVKGELVFEEIDFAYPSRPGNLVLRKFNLKAVACQTVGLVGS
SGSGKSTVINLLQRFYDPLGGEILLDGIGIKSLQLKWLRSQMGLVAQEPILFATTVKENI
LFGKEEASQEEIVQAAKAANAHNFISQLPNGYDTLVGQLGIQMSEGQKQRISIARALLRD
PRILLLDEATSALDSQSEKAVQDAFNQASLGRTTIIVAHRLSALRNADLIAVIQSGEVVE
AGSHDQLIQNRHGPYSAMVQLQKTFMKDEIISEPKGNESHNSTSTTEEAAPTAEIANKLS
PRLPSHQTNSNQQSEDHYSPPSIWQLMWMTTPEWKPTLVGCIGALSFGLVQPMSSFCMGA
LLAVYFINDHDEIRSQTKMYCFAFLAFAIFAFITNVIQHYHFGVMGENLTRRVREASLTK
ILTFEIEWFDQEHNSTGALCSRLSVDSTMARTLVADRLSLLTQAISAAALAVILGMVLAW
KLAIVVTALQPFVIGAFYTKAVMMRSMSKKILKAQNKSSELASEAVGNHRIITAFYSQEK
VLSLFEVTQKDPKNESLKQSWYAGLGLFTSQILSSGSAGLIFWYGGRLLYHKEISYKHLF
QTFFILVATGRLIAETGSMTADLSKGTNALKSVFMTLERKSKMDPDEIKGIKPEKLIGDI
EFKEVDFFYPTRPKQMILMGVSLKVDAGKVVALVGQSGSGKSTVIRMIERFYDPSKGSIE
VDGIDIKHYNLRALRLHIALVSQEPTLFAGTIQENIAYAKENASEAEIIEAATVANAHEF
ISSMKDGYATYCGERGVQLSGGQKQRLALARAILKNPAILLLDEATSALDVKLESLVQDA
LEKTMVGRTCLVVAHRLSTIQKSDKISVIDDGKIVEEGSHGELLAKGEKGAYFSLVKLQQ
HATMEKRELNLIGRNIEPSKDE
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactcgatttagaaacacagaaggatgatacattaacaagcaaaccagaagga
aatgaaaaaatagagaaggatgatggatcatcaaccaaacctgaagaaagtgggaaacct
gcaactccatctgggtcattacggtcgattttgagatactcggactggaaggacatggtg
ttgatgacactggggacgtttggctgtgttgcagacggattaaccatgtcagctatgatg
ctggttatcagcaaactgatgaatgcttacgccgttacatctctctcccttgcagacata
gataagtacgcattggccttactctatgtagcacttgtcataggtgcgggttcatttcta
gaaggattttgttgggcacgcaccgcagaaaggcaaacttctagactgcgcaggaaatat
ttacaagcagttctgcggcaagacgttggattcttcgagagaactcatggcgcatccatg
acctcccaagtagtctcaagtatttcaacagacattcttgtcatacaaggagttctcagt
gagaagcttccaaatttcatcatgaatatagcaatgttcatcacatctcaaatgactgct
ctgtacctctgttggagactggctattgttgccattcctgcactttccatgttgattatt
ccaggaatagtatatggaaagctgttatcagggcttggagagaagctacaagaagcttat
gctgttgctggaggaattgtggagcaggcaatatcatcaatcaggactgtttattcttat
gttggagaggaaagaacagtgaaaagctattcagttgcactggaaccgactttaaagctt
gggatcaaacaaggactgatgaagggaatggccattggcagcataggagttacatatgcc
gtttgggcactacaggggtggtatgggagcattttggtcactgacaaaggagttaaaggt
ggcaatgttttcgctacaggagcgtgcataatatacggaggacttgctcttggcagttct
ttcatcaatgtgaagcactttactgaagcaaatgcagcagctgcacttattttagaaatg
attgagcgtgtaccaagcatagattctgcagatcaacaaggcaaaaccatcaccgaagtc
aaaggtgaattggtgtttgaggaaattgattttgcatatccatcacggccaggaaactta
gtattaagaaaattcaatcttaaagcggttgcttgccagactgttggattggtgggtagc
agtggttcaggtaaatctactgtgattaatttgctccaaagattctatgatcctcttggg
ggagagatactgttggatgggattggcataaaaagccttcagctaaaatggttacgaagc
cagatgggtctagttgcccaagagcctatactttttgcaaccacagtcaaagagaatatt
ctatttggaaaagaggaggcctcacaggaggagatagttcaagcagctaaagctgccaat
gcacataacttcatttcacaactacccaatggatatgacaccctggtaggacaattgggt
attcagatgtctgaagggcagaaacaaaggatttccattgcaagggcattgctaagagat
ccaagaatcctgctgcttgatgaagccactagtgcgttggattcccagtctgaaaaggct
gtccaggatgctttcaatcaggcatcattaggaagaaccactataattgttgcacatcgc
ctgtctgcactgcgtaatgctgacttgattgctgttattcaatctggagaagtagtggaa
gctggttcccatgaccaacttatacaaaacaggcacggcccatactcagcaatggtgcag
ctgcagaaaacattcatgaaagatgaaatcatatcagagcctaaaggaaatgaaagtcac
aattccacctccaccactgaagaagctgcccccactgcagaaatagcaaacaaattgagt
cctcggttacctagtcatcagacaaacagcaaccaacagtcagaagatcattacagcccc
ccatctatctggcaactgatgtggatgacaacaccagagtggaagccaaccctagtcggt
tgcattggtgctcttagctttggattagttcagccaatgagctctttctgcatgggtgca
cttctagctgtttacttcatcaatgaccatgatgagattagatcacaaacaaaaatgtac
tgttttgccttcttagcctttgctatctttgctttcatcaccaatgtcattcagcattac
cactttggtgttatgggagagaacctgacaagaagggtcagggaggcaagcctcacaaag
atcttgacatttgagatcgaatggtttgatcaagaacacaacagcactggggctctctgt
tcgagattatctgtggattcgaccatggcaagaactcttgttgctgaccggttgtcactg
ttgactcaagccatctctgctgcagctttagcagttattttgggtatggttttagcttgg
aaacttgccattgtagttaccgctttacaaccattcgtcataggtgctttttatactaaa
gcagtaatgatgaggagtatgtccaagaaaatcttgaaagcgcagaataagagcagtgaa
ttagcaagtgaggctgttgggaaccacagaatcattactgcattctattctcaggaaaag
gttttgtcactttttgaggttacacagaaagatcccaagaatgagagccttaaacaatct
tggtatgctgggcttgggctatttacctcacagatcctctcttctggtagtgcaggacta
attttctggtatggagggaggctgctataccataaagaaatttcatataagcacctgttt
cagacatttttcatcctggtggcaacagggagacttattgcagaaacggggagcatgact
gctgatttatcaaagggcacaaatgcattaaagtcagtttttatgactctagaaagaaag
agcaaaatggacccagatgaaatcaaagggataaaaccagaaaagcttattggagatatc
gaatttaaagaggtggatttcttttatccaacaagaccaaaacagatgatattgatgggt
gtaagcctaaaggttgatgctggaaaagtagtggcattagtcggccaaagtggatctgga
aaatctactgtcatcagaatgattgagagattctatgacccatcaaaaggatccattgaa
gttgatggaattgacatcaaacactacaatctaagagctttaaggttacatattgcattg
gtaagtcaggagcccactctatttgcaggaactatccaggaaaacattgcatatgcgaaa
gagaatgcaagtgaagctgagattattgaagcggccactgtagcaaatgcccatgaattt
ataagttccatgaaggatggttatgcaacctattgtggggaaagaggtgtgcaactatca
ggagggcaaaagcagagattagctcttgctcgagcaatcttgaaaaatcctgcaatattg
cttttagatgaggcaacgagtgcattggatgtcaaattggagagccttgttcaagatgca
ctggagaagaccatggttggtcggacatgcctggttgtagctcatcgactgtccacaatt
caaaaatcagataaaatatcagtgattgatgatgggaagattgtggaagaggggtcgcat
ggtgagctacttgctaagggagaaaaaggtgcatatttttcacttgtaaaactccaacag
catgccaccatggagaagagagagctcaatttaattggtaggaacatcgagccatccaag
gatgaatga
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integrated database retrieval system
