Vitis riparia (riverbank grape): 117904301
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Entry
117904301 CDS
T07274
Name
(RefSeq) deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00240
Pyrimidine metabolism
vri01100
Metabolic pathways
vri01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
117904301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vri02044
]
117904301
Enzymes [BR:
vri01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
117904301
Secretion system [BR:
vri02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
117904301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-GeneID:
117904301
NCBI-ProteinID:
XP_034672728
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Position
17:complement(19794617..19799261)
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AA seq
228 aa
AA seq
DB search
MNSREVALVSAATIFGALASTLAIRFFFTNPKNYFSGKYSSQNGQNGVVSKTASSQSPFD
PSKRRGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKL
PWAKKSKTGDPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVS
EVIYFVEKRLNNSQVAYIASHKLLSMAGVKVRKHQPQMDQILIKFEEL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcgagaagtcgcactggtctccgcagccaccatcttcggagccctggcttcc
acactcgcgattcgcttcttcttcaccaaccccaaaaactacttctctggaaagtactct
tctcaaaatggtcaaaacggcgtcgtttccaagaccgcttcttctcagagccctttcgac
ccctcaaaacgaagagggtacttgtcttgggatgattatttcatggcaattgcgtttctg
tcagctgaaagatctaaggatcctaacaggcaggttggtgcatgcttggtgagtcaaaat
ggagtgattcttggcattggctataatgggttcccaagaggctgttcagatgacaagctc
ccttgggcaaagaaatccaaaactggggatcctttggagacgaagtatccttatgtttgt
catgctgaagtcaacgccatcctaaacacaaaccatgcatctgctgctggacagaggctt
tatgtgaccatgtttccttgcaacgaatgtgccaagataatcattcagtcaggtgtctct
gaagtcatctattttgtggagaagaggttgaacaactcacaagttgcatatatcgcttct
cacaaacttctatcaatggctggcgtaaaagtgaggaaacatcaaccacagatggaccag
attttgatcaagtttgaggagctctag
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