Vitis riparia (riverbank grape): 117904322
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Entry
117904322 CDS
T07274
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117904322
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117904322
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
117904322
NCBI-ProteinID:
XP_034672759
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Position
17:complement(13389595..13392096)
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AA seq
399 aa
AA seq
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MASRLEILFLVSLFSVLLTPLHCSVFDVTQYGAIGNGSTDDSPAFMLAWTDVCNSSASTP
IFHIPGNKTFLLNPVFFQGPCRSTNIQFQIDGIITAESEPSNWKCTRNRCDKWIHFKRVD
GLFINGSGIIDGKGKNWWSSGYIKADVRPSALEVTSSNKVQLTGLSFRNNPHMHVVFDSC
DMVHISNVSIDAPGDSPNTDGIHLKESTHVNIEFCSIRTGDDCISIVDKSSNITIQNIEC
GPGHGISIGSMGQYGAYETVENIYVSDVQFKGSLSGVRIKTWQGGKGHARKMVFKGITSL
NTQYPIQIDQFYCPHAKCNEQADAVEISDISYIDIKGTSMRKTAVKLACSESVPCKNIFM
QDINLSYQGTNASAYCKNVNGTSQGIMEPSVPCLYYQTS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgtctggaaattctcttccttgtatctctcttttcggttctgctaacccca
ttgcattgtagtgtttttgacgtaacccaatatggagcaattggaaatggcagcacagac
gacagtccagctttcatgcttgcttggactgatgtctgcaactcttcagcttctactcca
atattccatattcctgggaacaaaacctttttgctcaatcctgtgttcttccagggtcct
tgcaggtccacaaacatccagttccagatagatgggatcataactgctgaaagtgaacct
tcaaactggaaatgtacaagaaatagatgcgataagtggattcattttaagcgtgtggat
ggacttttcatcaatggttccggtatcattgacggcaaagggaagaattggtggagttca
ggttatattaaggctgatgtgaggccaagtgctttggaagtgacgagctcgaacaaggtc
caattgacaggattaagtttcagaaacaatcctcacatgcatgtagtctttgattcctgc
gacatggtgcatatttcaaatgtatcaatagatgcacccggggacagtccaaatacggat
ggtattcacctcaaagagagcacccatgtcaacatcgagttttgcagcattagaactggc
gatgattgcatatcaatagtagacaagtcctccaacatcaccattcaaaatattgaatgt
ggtcctggccatggcataagtattggaagcatggggcaatatggagcatacgagaccgta
gaaaatatttacgttagcgatgttcaatttaaagggagcttgagtggtgttcggatcaag
acatggcagggaggcaaaggtcatgcaaggaaaatggtcttcaaggggataacatcctta
aacacccagtaccctatccaaattgaccaattttactgcccccatgcaaaatgcaatgaa
caagctgatgcagtggaaatcagcgatatctcatatattgatataaaggggacatcaatg
aggaagacagcagtgaagttagcctgcagtgaatcagttccatgcaaaaatatattcatg
caggacataaacttgagttaccaggggactaatgcctcggcttactgtaagaatgttaat
ggaacgtctcaaggaataatggaaccttctgttccttgcttgtattatcagacatcgtag
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