Vitis riparia (riverbank grape): 117904339
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Entry
117904339 CDS
T07274
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
vri04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117904339
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117904339
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117904339
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117904339
03036 Chromosome and associated proteins [BR:
vri03036
]
117904339
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117904339
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117904339
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117904339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
PPFR1_M
PPP2R1A-like_HEAT
HEAT_2
PIK3R4-like_middle
RELCH_N
RELCH_C
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
TPR_DNAAF5
HEAT_GCN1_C
HEAT_GCN1
Adaptin_N
CLASP_N
Cnd1
HEAT_GCN1_C_2
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
117904339
NCBI-ProteinID:
XP_034672792
LinkDB
All DBs
Position
17:complement(16407526..16424421)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGAQMREP
DLVEAFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKTELRAIYSQLCQDDMPMVR
RSAASNLGKFAATVEAAHLKADIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIDQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIIPQV
LDMINNPHYLYRMTILHAISLLAPVMGPEITCSKLLPVVINAAKDRVPNIKFNVAKVLQS
LTPIVDQSVVDKTIRPCLVELSEDPDVDVRFFASQALQASDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgacgagcctctgtatccaattgcggttttgatcgatgagctaaagaac
gaggacattcagcttcgattgaactcgatccggcggctctcaacgattgctagggcgcta
ggagaggagaggactaggaaggagttgattccatttctgagcgagaataatgatgacgat
gatgaggtgcttcttgcgatggctgaagaattgggggtatttattccctatgtcggaggt
gttgagcacgcgaatgttctgcttcctccattggagaccctctgcactgttgaggaaact
tgtgtgagggacaaagcggtggagtcgttatgcaggattggagctcaaatgagggagcca
gatttggtggaagccttcattccattggtgaagagattggctgctggcgagtggtttact
gctcgagtttcctcatgtggattatttcatattgcttaccccagcgctccagagacatta
aaaactgaattacgagcaatatatagccagctgtgtcaagatgacatgccaatggtgagg
agatctgctgcatcaaatctgggaaagtttgctgctactgttgaagccgctcatttgaag
gctgacatcatgtcaatatttgaggatctgacacaggatgatcaagattctgttaggtta
ttggctgttgagggttgtgcagctctcggaaagctgttggaacctcaagattgtgtagca
catattcttcccgtaattgtgaatttctctcaggataagtcttggcgtgttcgctatatg
gttgcaaatcaattatatgagctatgtgaagctgttggtcctgagcctaccaggtcagac
ttggttcctgcatatgttcggttgcttcgtgacaatgaggctgaagtacgcatagcagct
gcaggaaaagtaacaaagttttgccggattttgaacccagaacttgcaattcagcatatt
cttccttgtgtgaaggaattatcatcagattcttcccagcatgttcgttctgctttggct
tcagttattatgggaatggcacctgttttaggaaaggacgcaacaatagatcaacttctg
cccattttcctttctctgcttaaagatgagtttccggatgtccgactgaatattatcagc
aagcttgatcaagtaaaccaggtgattggaattgatctgctgtctcaatccttactgccg
gccattgttgagcttgctgaggatagacactggagggttcggcttgcaataatagaatac
attcctttactagcaagtcagctgggtgttggtttttttgatgacaagcttggtgctctt
tgcatgcaatggttaaaagataaggtttattcaattcgtgatgcagctgctaataatgtg
aagcgccttgcagaggaatttggcccagattgggcaatgcagcacataattccacaggtt
ttggatatgattaacaacccacactatctgtatcggatgaccatcctccatgcaatttct
ctccttgcccctgttatgggcccagaaattacatgctcgaaacttctgccagtggtcatt
aatgcagcaaaagacagggtacccaacataaagttcaatgtggctaaggtgttgcagtca
cttactcctatagtggaccagtctgtggtagacaagacaattcgtccctgtttggttgag
ctgagtgaggacccagatgttgatgttaggttttttgcaagccaagcactacaggcaagt
gatcagatcatgatgtctagctag
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