Vitis riparia (riverbank grape): 117904367
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Entry
117904367 CDS
T07274
Name
(RefSeq) protein SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117904367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117904367
04131 Membrane trafficking [BR:
vri04131
]
117904367
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117904367
Membrane trafficking [BR:
vri04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
117904367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
DSE1_N
Motif
Other DBs
NCBI-GeneID:
117904367
NCBI-ProteinID:
XP_034672840
LinkDB
All DBs
Position
2:complement(18550684..18563869)
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AA seq
325 aa
AA seq
DB search
MEKSLVTLDNGTTCSSWNYNGERLATGSVDGTLAIFDSIDPASSSFTCTSRSRVHEDSVV
KVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPT
SLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRG
ESQQSSFVLGFHSDTPQLNSAKVWEFDQDHQRWLPVAELALHGDKGDQVFTVAWAPNIGR
PYEVIAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATTGG
DGMVRLWQSNLNGVWHEQAALEPTS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatctctggtgacactcgacaacggcaccacatgctcttcctggaactacaat
ggcgagagattggcaacgggctcagtcgatggaacactggccatcttcgattcaatcgac
ccggcttcttcatccttcacttgcacctccagatctagggtgcatgaggatagcgtagtg
aaagtggtttgggtccctccggaatatggcgatgcagttgggtgcatttgtgctgatgga
actttgtcattgtgggaggaggttgtagaagatgcacaaccccttcaatggaaactatgc
aaaagttttggaagtaattcaaataaagtgctcgatgtccaatttggagtctcgccaaca
agtttgaaaatggttagtgcatattcagatggccacgtgaaagtctatgagctcctagat
ccattggaactgaagagttggcaacttcaggctgaatttcagaatgctagtgattcagtg
tctacatttgggaaggctttgtgcttatctgcatctgtctcttggaatccacaaagaggt
gaaagtcagcaatcaagctttgtcttgggttttcattctgatactccgcaactcaattcc
gcaaaggtctgggaatttgatcaggatcaccaaagatggcttccagttgctgagttggct
ttgcatggggataagggtgatcaggtcttcactgttgcatgggcacctaatattggcagg
ccatatgaggtaatagctgttgcaactcacaagggaatcgcgatatggcatcttgggctt
aaccctgacattgatggaaggctctcagtggagagggttgccctgctttctggtcatgat
ggggaggtgtggcagatggaatgggacatgagcggaatgaccttggcaactactggagga
gatgggatggtaaggctgtggcagtctaacttgaatggtgtttggcatgaacaggctgca
ctggagcccacttcttag
DBGET
integrated database retrieval system