Vitis riparia (riverbank grape): 117904530
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Entry
117904530 CDS
T07274
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117904530
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117904530
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117904530
04121 Ubiquitin system [BR:
vri04121
]
117904530
Enzymes [BR:
vri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117904530
Peptidases and inhibitors [BR:
vri01002
]
Metallo peptidases
Family M67
117904530
Membrane trafficking [BR:
vri04131
]
Endosome - Lysosome transport
Others
Others
117904530
Ubiquitin system [BR:
vri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
117904530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
NSUN5_N
Motif
Other DBs
NCBI-GeneID:
117904530
NCBI-ProteinID:
XP_034673076
LinkDB
All DBs
Position
17:16800999..16824496
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AA seq
506 aa
AA seq
DB search
MRPSSGGINIAASAQKLDVDNRISLRYYYRIADNILKQADIFREEKNIIDLYIMLLRFSS
LTSETIPCHRDYKASLQSKKNYLKKNLLRALCELEELKPAVRQKIDELNQKHTYQVNRWG
ADSSLEWPHVRKQTLTKHEMTKTPRPTARDFEYQGSKIQQFSRAKPVEEQFRRLSVGILR
PREETLSRHSILGPNGLHGQWQPPTIDKRVQYPSNLDLTPVQFPSLQHHVEDGLMNNNEA
SSSEHEQSSLESVLTLNEDNQIHPAEELGSLISFETTETPHTEIIRQPSPPPVLADVQDL
IPETPTQVSEVNGQMETPSTDGLVCSEAPLEMHISTVLMESFLKLAKSNTVRNLETCGIL
AGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQSCFMS
SVDLHTHYSYQTMLPEAIAIVMAPKDASKKHGIFRLTTPGGMSVIRHCDQRGFHPHHSPS
DGGPIYKSCTDVYMNPNIHFDVIDLR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcggccttcttcgggaggaatcaacatcgccgccagtgctcagaaactcgatgtcgat
aatcggatttccctccgttactactaccgtatcgctgataatatcctcaaacaggctgac
atatttcgagaagagaagaacattatagatctctatattatgcttctaaggttttcaagt
ttaacttctgagactataccatgccatcgtgattataaggcatctctacaaagcaaaaag
aattatttgaagaagaacttattgagagccctgtgtgagttggaggaattgaagccagcc
gtgcgacagaagattgatgaattgaaccagaaacatacatatcaagtaaacagatggggt
gctgattcctcactggaatggcctcatgttaggaaacaaactttgacgaaacatgagatg
acaaagacaccacgacccactgctcgagattttgaatatcaaggttcaaagattcagcag
ttctcgcgagccaagccagtggaagagcaattccgcagactatctgttggtatcctgcgc
ccaagggaggaaactctatccagacactctattttgggtccaaatggacttcatgggcag
tggcagccacctaccattgataaaagggtccaatatccaagcaatttagatttgactcca
gttcaatttccaagtctgcagcatcatgtggaggatggacttatgaataacaatgaagct
agcagctcagaacatgagcaatctagtttggaatcagtccttacactgaacgaggataat
cagattcatcctgctgaggaactgggttccttgatttcttttgaaaccacagaaactcct
catacagagattatcagacagccttctcctccacctgttctggcagacgtacaagatttg
atcccagagactcccacccaagttagtgaggtaaatggccaaatggagaccccatcaacg
gatgggttagtttgttctgaagctcccctcgaaatgcacatttcaactgtattgatggaa
agcttcttgaagcttgctaagtcgaacactgtcaggaatttggaaacttgtggtatcctt
gcaggttcacttaagaacagaaaattttatgtcacagctctcattattccgaagcaggag
tcaacatcagattcatgtcagaccacaaatgaagaggaaatttttgaagtgcaggataag
caatccctcttccctcttgggtggatacatactcatcctacccagtcgtgtttcatgtct
tctgttgatcttcatacccattactcatatcagactatgctaccggaagccatagcaatt
gtcatggcaccaaaggatgcttcaaaaaagcatggcattttccgcctgacaactccaggt
ggcatgtcagtcataagacactgcgaccaacgtggctttcatccacatcattctccttcg
gatggtgggcccatctacaaaagctgtacagatgtttatatgaatcccaatatacatttt
gatgtcattgatcttcggtga
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