KEGG   Vitis riparia (riverbank grape): 117904617
Entry
117904617         CDS       T07274                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117904617
Spliceosome [BR:vri03041]
 Complex B
  Other components
   Complex B specific factors
    117904617
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 LisH_TPL Beta-prop_EML NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 VPS8_N DUF7165 Beta-prop_WDR75_2nd Beta-prop_LRRK2 zf_topless Beta-prop_IFT122_2nd Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 117904617
NCBI-ProteinID: XP_034673200
LinkDB
Position
17:9269080..9290949
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFIADINSGRWDA
ILPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDVDDMYPTTLGHTIKFGTKSHAEYARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGSQILSASFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTN
DGGRVVTASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNGVHLFPKNTDHIIVCNRT
SSIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLEHL
MKVHEKDVIGVTHHPHRNLVATYSEDSTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcatcgaccttagaaatcgaagctcgagatgtcattaagatcgtgcttcagttttgt
aaagaaaattccttgcaccaaacgtttcagacattacaaagtgagtgtcaggtatctttg
aatacggtcgacagcctcgagacatttattgctgatattaatagtggaaggtgggatgca
atattgcctcaagtagcacaacttaagcttcccaggaagaaactggaggatttgtatgag
cagattgttttagaaatgattgaactgcgagaattggatactgcacgtgctattttaaga
caaactcaggcaatgggtgtcatgaaacaagagcagcctgaaagatatttgcgtcttgag
catcttcttgttcgaacttattttgatccacatgaggcttatcaagattcaacaaaagag
aaacgtcgtgctcaaattgcccaagcccttgctgctgaagtttctgtagttcctccatca
cgattaatggctctcattggtcaggctctgaagtggcagcaacatcaagggttacttcca
ccaggaacacagtttgacttgttccgaggaacagctgctatgaaacaagatgtagatgat
atgtatccaacaactctcgggcacaccatcaagtttggaacaaaaagtcatgcagaatat
gctcggttttctccagatgggcagtttcttgtgtcttgctccgtggatggatttattgag
gtttgggaccatataagtgggaaacttaagaaggatcttcagtatcaggctgatgaaacc
tttatgatgcatgatgatgctgtcctttgtgttgattttagcagagattcggagatgctt
gcatctggatcacaagatggaaaaatcaaagtgtggcgtataaggactggtcaatgctta
cgccgacttgaacgtgcacattcccaaggtgttacaagtcttgttttctctcgagatgga
agtcagatactaagtgcatcctttgacagcactgcaagaatccatggactgaagtctggg
aaactgttaaaggaattccgtggccattcatcttatgtgaatgatgctatatttacaaac
gacggaggtcgtgttgttactgcctccagtgattgcacagtaaaggtctgggatgtgaag
acaaccgactgtttgcagacatttaagccaccacctcctttaaggggtggtgacgcatct
gtaaatggcgttcatcttttccccaaaaatacagaccatattattgtgtgtaacaggaca
tcatcaatataccttatgacacttcaaggacaggttgtgaagagcttctcttctggtaaa
agagaaggtggagattttgttgcagcctgtgtctcacccaaaggagaatggatttattgt
gttggtgaagacaggaatatctactgcttcagctaccaatcgggtaaattagagcatcta
atgaaggtgcatgaaaaggatgtaatcggcgtaacccatcatccccacaggaatctggtt
gctacatatagtgaagacagcaccatgaaattatggaaaccttga

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