Vitis riparia (riverbank grape): 117904631
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Entry
117904631 CDS
T07274
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117904631
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Gene cluster
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Motif
Pfam:
Sel1
TPR_2
TPR_8
TPR_1
TPR_19
TPR_7
Motif
Other DBs
NCBI-GeneID:
117904631
NCBI-ProteinID:
XP_034673217
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Position
17:complement(18899337..18910690)
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AA seq
674 aa
AA seq
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MGRFCYTLLVVLALLPLSTLARPFVLILTPDDLSDTAPPSSESTADSGDTSDWDEFGDSD
ARLDDELDPGSWRPILEPDSGPEPKTEDEAVYYSGVAKMIAAASSGGPRVMEEAASEIEA
AATAGNPLAQSALGFLYETGMMRERNKAKAFMYHYFATDGGNTQSKMVLAYTYSRQDMYD
KAVELYAELAEIAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSRGEEDEDFQILEYQA
QKGNAAAMYKIGIFYYFGLRGLRRDRAKALLWFLKAVEKGEPRSMELLGEIYARGAGVER
NYTKALEWLTLASQRLPSAYNGMGYLYVKGYGVEKKNYTKAKEYFEKAVDHDEAGGHYNL
GVMYLKGVGVKRDVKLACNYFIMAAKEGQPKAFYQLAKMFHTGVGLKRNLPMATALYKLV
AERGPWSSLSRWALESYLKGDVGKAFLLYSRMAELGYEVAQSNAAWILDKYRERSMCIGE
SGFCTDAERLQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTERDYDRAAKAYMHAKSQS
NAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALEIDSAAKLPVTLALTSLWIRKNYASSF
LVDLVDSLPEVYPKVEAWVENVIMEEGNATILTLFVCLLTVLYLRERQRRHVAAAPEAAL
PLLPNEHGVLAAPH
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggttctgctacactcttctcgtcgtacttgcgctcctccctctttctacactc
gcacgcccattcgtcctcatcctcacccccgacgacctcagtgacaccgcaccaccgtcc
tccgaatccaccgcggacagcggcgacacgtcggactgggatgagttcggggactccgac
gccaggctcgacgacgagctcgacccgggctcctggcgcccgatcttggagccggattcg
ggtccggaaccaaagactgaggatgaggcggtgtactactccggcgtggcgaagatgata
gctgctgctagctctggcggaccgagggtcatggaagaggcggcatcggagattgaagcg
gccgcgacagcggggaacccccttgcgcagtcggcgttagggtttttgtatgagacgggg
atgatgagggagaggaacaaagccaaggcgtttatgtatcattactttgctaccgatggc
ggtaacacgcagtctaagatggttcttgcctacacttactcgcgccaagatatgtatgat
aaagcggttgagctatatgctgaattagcagaaatagctgtgaacagttttttaatttcg
aaggattcaccagtgattgaacctgttaggctccataatggagctgaagagaacaaagag
gccctgaggaagtctagaggggaggaagatgaagacttccagatcttggaataccaggct
caaaaagggaatgcagcagctatgtataaaattgggatattttactactttggattgaga
ggattgaggcgtgatcgtgccaaggcattgttgtggtttctaaaggctgtggagaagggg
gagccaaggtccatggaacttcttggggagatttacgcaaggggagctggtgttgagagg
aactacactaaggcgttggaatggctaacgctcgcatcccaacgactcccttcagcttat
aacgggatggggtatttatatgtgaaaggttacggagtggaaaagaagaactacaccaaa
gcaaaagaatactttgagaaggctgttgatcatgatgaggctggtgggcactataaccta
ggtgtaatgtatctcaaaggagttggagtaaaaagggatgtgaagctagcttgcaattat
tttataatggcagctaaagaagggcagccaaaggcattttaccagttggcaaagatgttc
catactggtgtggggcttaagaggaatcttcctatggctactgcattatacaaactagtt
gcagaacggggaccatggagttccttgtctagatgggcactggagtcatacctaaaaggt
gatgtggggaaggcgttcctcttgtactctaggatggctgagctaggctatgaggtggca
caaagtaatgctgcatggattcttgacaaatatagggaacgtagtatgtgcataggagaa
tctggattttgtacagatgcagaaaggcttcagcgggcacattctttgtggtggcaagct
tctgagcagggtaatgaacatgctgctttgctgatcggggatgcttattactatggtcgg
ggtactgagagagattatgatcgagctgcaaaggcatacatgcatgccaagtcccaatcc
aatgcacaggccatgttcaaccttgggtacatgcatgagcatggacaaggacttccattt
gatcttcatcttgcaaagcgttactatgatcaagccctagagattgattctgctgcaaaa
ttgcctgttacattggctcttacgagcttgtggatacgaaagaactatgccagcagtttc
ctagttgacttggtcgattcactgcctgaagtctatccaaaagtggaagcatgggtggag
aatgtgatcatggaggaaggaaatgcaacaattctcaccctttttgtctgcctactgaca
gtcctttaccttcgtgaacgacaacgtaggcatgtggctgctgctccagaggcagccctg
ccactcctccccaatgagcacggtgtacttgctgcaccccattaa
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