Vitis riparia (riverbank grape): 117904635
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Entry
117904635 CDS
T07274
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00280
Valine, leucine and isoleucine degradation
vri01100
Metabolic pathways
Module
vri_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117904635
Enzymes [BR:
vri01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
117904635
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Gene cluster
GFIT
Motif
Pfam:
MCCA_BT
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
ATPgrasp_ST
ATP-grasp_4
NQRA_N
RnfC_N
QRPTase_N
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
117904635
NCBI-ProteinID:
XP_034673220
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Position
17:complement(17485362..17503223)
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AA seq
747 aa
AA seq
DB search
MSSMASLLRRRLPRRIFIVQKKAFSSSPDEGNTARRIEKILIANRGEIACRIIRTAKRLG
IRTVAVFSDADRDSLHVKSADEAVHIGPPSARLSYLSAQSIIDAAVHTGAQAIHPGYGFL
SESAAFAQLCEDEGLTFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDFMK
SEGEKIGYPVLIKPTHGGGGKGMRIVQSPSEFVEAFLGAQREAAASFGINTILLEKYITK
PRHIEVQIFGDKFGNVLHLNERDCSVQRRHQKIIEEAPAPNIVNDFRTHLGQAAVSAAKA
VGYHNAGTVEFIVDTISGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPMN
QSQVPLLGHAFEARIYAENVSKGFLPATGILHHYRPVPVSSTAVRVETGVEHGDTVSMHY
DPMIAKLVVWGENRAAALVKMKDCLSKFQVAGLPTNINFLQKLANHWAFENGKVETHFIE
HFKDDLFVDPSNLLLANEAYDAAKFSAVLIAACVCEKERCNLKESPPGGKSSLSIWYAYP
PFRVHHSARRTMELDWDNEYDSSSSKLLTLSITFQPDGNYLIETGEENSPDWEVKVAHLG
NSDFRVEVDGLSRDVSLAVYSKDQTKHFHIWHGSHHHTFRQRVGLQLSADDEAQHKPSFE
ATYHPPGTVVAPMAGLVVKVLVKDGTKVEEGQPILVLEAMKMEHVVKAPSAGHLHGLQVT
AGQQVSDGSFLFSVQACAEVDYQIWPG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatggcgtcgctgctccggcgaaggcttccacgcagaatctttatagttcag
aagaaggcattctcgtcatctccggacgaaggcaacactgcgcgacggatagagaagatt
ttgatcgcgaacagaggcgaaattgcttgcagaattattcggactgcgaagcggttgggg
attcgaactgtcgccgttttcagtgatgcggatagggattcgcttcacgtgaaatcggcc
gacgaggccgtgcatatcggtccaccatcggctcgattaagttacttgagtgctcagtcg
attattgatgctgcggtgcatactggcgcgcaggctatccacccaggctatggtttttta
tcagaaagtgctgcatttgctcaactttgtgaggatgagggtcttacattcataggacct
ccagcatctgctatccgtgacatgggtgataaaagtgcatcaaagagaataatgggtgca
gctggggtaccacttgtacctggataccatggaaatgaacaagatattgactttatgaaa
tcagaaggagagaaaattggatatcctgtcttgataaagccaacccatggaggtggagga
aagggtatgaggattgtgcaaagtccaagtgaatttgttgaagcttttttgggagcacaa
cgtgaagctgctgcttcttttggcataaacacaatcttgctggagaaatatatcacaaag
ccaaggcacatagaagtccaaatatttggggataaatttggcaatgttcttcatttaaat
gagagagattgcagtgtacagagaagacaccagaagataattgaggaagctccagctcca
aacattgtcaatgacttccgcacccacttgggtcaagctgctgtatctgcagccaaggca
gttggctatcacaatgctggcacggtggagtttatagtggataccatctcaggccaattt
tattttatggagatgaatacccgccttcaggttgagcaccctgtgactgagatgattgtt
gggcaagatcttgtagagtggcaaatccgtgttgcaaatggcgaacccctgcccatgaat
cagtcacaagtgcccttattaggtcatgcctttgaagcccgaatatatgctgaaaatgtt
tcaaaaggatttcttccagccactggaattcttcatcattatcgtcctgtcccagtctct
tcaacagcagttcgggttgaaactggagttgaacatggagacactgttagcatgcattat
gatcctatgattgctaagctcgtagtatggggagaaaatcgggctgcagcattagttaaa
atgaaggattgcttatcaaaatttcaggttgcaggtttgccaaccaatatcaatttcctc
caaaaacttgctaaccattgggcatttgaaaatggaaaagttgaaacccattttattgag
cactttaaagatgacctatttgttgatccaagtaatttattattagcaaatgaagcttat
gatgctgctaaattcagtgcagttcttatagctgcatgtgtttgtgaaaaggaacgttgt
aacttgaaggaaagtcctcctggtggcaaaagctcactctcaatatggtatgcatatccc
cctttcagagtccatcatagtgctaggcgcacaatggaacttgactgggacaatgaatac
gatagcagtagctcaaagcttttgacactttccatcacttttcagccagatggaaactat
ctaatagagacaggagaagaaaactcccctgattgggaagtcaaagtagcacatctaggc
aattctgatttcagagttgaagttgatggtttgagcagggatgttagtttagctgtttac
tccaaggatcagactaagcatttccatatatggcatggttcacatcatcatactttcaga
caaagggttgggcttcagttgtctgctgatgatgaagcgcaacacaagcccagttttgag
gccacatatcatcctccagggactgtggttgcacccatggctggtttagtggttaaggtt
ctagtgaaggatgggaccaaagtggaagaagggcaacctatattagtgttagaagcgatg
aagatggagcatgttgtgaaagcaccatctgctgggcatctccatgggcttcaggtcaca
gctggccaacaggtttctgacggtagttttctcttcagtgtccaggcatgtgctgaagta
gattaccaaatatggccaggatga
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