Vitis riparia (riverbank grape): 117904636
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Entry
117904636 CDS
T07274
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117904636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117904636
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117904636
Prokaryotic type
Archaeal type
TFB
117904636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
RB_B
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
117904636
NCBI-ProteinID:
XP_034673223
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All DBs
Position
17:159649..165920
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AA seq
312 aa
AA seq
DB search
MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF
DIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWY
AKEEDLRNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcgttttgcaccgattgtaagaagaacaccgaggtcgtgttcgatcactcg
gcgggcgacacggtgtgttccgagtgcgggcttgtgctggagtctcactcgattgatgag
acctccgagtggagaacgttcgcgaacgagtccggcgacaatgacccggtccgtgttggc
ggcccatccaacccacttctcaccgacggtggcctttcgaccgttatagcgaagccgaac
ggggtttcgggagatttcttgtcgagttcgctagggcggtggcagaatcgggggtcgaat
ccggatcggggtctgattctggctttcaagaccatcgcgactatgtctgataggttgggc
cttgttgcgaccataaaggaccgcgctaatgaaatatataagaaggtagaagatcaaaag
tctactagaggaagaaatcaagatgctctgttggctgcctgtctctatattgcttgtcga
caagaagacaaaccgcgcactgtaaaggaaatttgctctgttgccaatggagccacaaag
aaagaaattggccgagcaaaagaatacatagtgaaacaactggaggctgagaagggccaa
tcggtagagatgggaaccatacatgctggagactttatgaggagattttgttccaatctt
gggatgaccaaccaagtggttaaagctgcccaagaagctgtgcagaagtctgaagagttt
gatataaggaggagccctgtatcaattgcagcagcagttatttacattataacccagctt
tcagatgagaagaagcttctccgagatatctcaatagctacgggagttgcagaaggaaca
atcagaaactcgtacaaggatctctatccccatatctcaaggataataccaagctggtat
gccaaggaggaggatctccgaaatctttgcagcccttaa
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integrated database retrieval system
