Vitis riparia (riverbank grape): 117904697
Help
Entry
117904697 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3 isoform X1
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117904697
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117904697
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117904697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117904697
NCBI-ProteinID:
XP_034673333
LinkDB
All DBs
Position
17:complement(10485005..10492660)
Genome browser
AA seq
381 aa
AA seq
DB search
MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYDLCTYPLHIWIMVDYTTVFVFRLLMFV
DNGLAAGMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTVIGTLWFTRARDCLPEE
GQKWGFLIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW
AFEAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLE
EFHVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALTNFRADSERSSA
SVVTATRYVRVQPPSQGYMLRLQGFLRPVRTENAGVGNDADNALENAENGGLPVVTHDAT
NTEPAPFDNGVLVHHSTPPQS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctatccgaggagtagatttcaagtggtatgatgggtttttcttgtcgatgctcgct
actagtgtaataattgtagcaatcaattggaagcgatacgatctatgtacatatccgttg
catatatggatcatggttgactataccactgtgtttgtttttcggctcttgatgtttgta
gataatgggcttgctgctggaatgggtttggattttgggtggcagcagagatatgctcgc
ttttgtggaagaatagtggttctttccattctttctttgctactttatccctttctttgg
gcttggactgtaattggtactctgtggttcactagggcaagagactgtttacctgaagaa
ggtcagaaatggggtttccttatttggttgcttttcagctattgtggactcctttgcatt
gcttgcatgtccatggggaagtggttttcacgaagacaagcacacttactacgtgctcaa
caagggattcctgtttcagaatatggggttttggtggacatgatcagggtaccagattgg
gcttttgaagctgcaggtcaggagatgagaggcatgggtcaagatgctgctgcataccat
cctggcctttacttgactccaactcagagggaagcagtggaggctcttattcaagaactt
ccaaagttcaggctgaaggcagttccaactgattgcagtgaatgtcccatctgcttagaa
gagttccatgtgggaaatgaggttcgtggccttccctgtgctcacaatttccatgtggaa
tgcattgatgagtggctccggttgaatgtgaaatgtcctcgttgccgctgctcggtcttc
ccaaaccttgaccttagcgcgctgaccaattttcgggccgattcagaaagatcatcagct
agtgtggtgacagccactcgttatgtgagagtccaacctcccagccagggctatatgttg
agattgcagggctttctccgcccagtccggacagaaaatgcaggggtaggcaacgatgca
gataatgctttggaaaatgctgagaatggtggtctgccagttgtaacgcatgatgccaca
aacacagaaccagcaccttttgataatggagtgctggttcatcactccaccccacctcaa
agttaa
DBGET
integrated database retrieval system
