Vitis riparia (riverbank grape): 117904769
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Entry
117904769 CDS
T07274
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vri04990
]
117904769
Domain-containing proteins not elsewhere classified [BR:
vri04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
117904769
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Vps41
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_ELP1_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
117904769
NCBI-ProteinID:
XP_034673415
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Position
17:complement(18336466..18351129)
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AA seq
609 aa
AA seq
DB search
MPELSETYACVPSTERGRGILISGDPKSNAILYTNGRSVIIRYLHKPLEVSIYGEHAYQA
TVARFSPNGEWIASADVSGTVRIWGTHNDHVLKKEFRVLSGRIDDLQWSADGMRIVVSGD
GKGKSFVRAFMWDSGSNVGEFDGHSKRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KQSHRHHSNFVNCIRYSPDGSKFISVSSDKKGVIYDGKTGEKIGELSSEDGHKGSIYAVS
WSPDSKQVLTVSADKSAKVWEISEDGNGKVKKTLTCPGSGGVEDMLVGCLWQNDHLVTIS
LGGTVSIFSASDLDKGPLSFSGHMKNVNSLAVLKSNPKVILSTSYDGLIIKWIQGIGYSG
RLDRKENSQIKCFAAVEEEIVSSGFDNKIWRVSLQGDQCGDADCVDIGSQPKDLSLSLLS
PELALVSTDSGVVILRGTNVVSTINLGFPVAASVISPDGSEAIIGGQDGKLHIYSVTGDT
LKEEAVLEKHRGAITVIRYSPDVSMFASGDANREAVVWDRASREVRVKNMLYHTARINCL
AWSPDNSMVATGSLDTCVIIYEIDKPASSRVTIKGAHLGGVYGLAFTDDTSVVSSGEDAC
VRVWKLTPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctctccgaaacctacgcctgcgtgccgtccacggagcgcggccgaggcatt
ctcatctccggcgatcccaaatccaatgccattctctataccaacggtagatccgtcatc
atccgctacctccataagcctctcgaggtctccatctatggagagcacgcgtatcaggct
accgtggcgcgtttctcccccaacggcgagtggatcgcatcagcggacgtctcaggaacg
gttaggatttgggggacgcacaatgatcatgtgctgaagaaggagtttagggttttgtct
ggtcggatcgatgatcttcaatggtcagcggatgggatgaggatcgtggtgtctggtgac
ggcaagggcaagtcgtttgttcgcgcttttatgtgggactcaggcagtaatgtgggggag
tttgatggccattcaaagcgagttcttagctgtgcatttaagccaacccgaccatttcgc
atagtcacatgtggagaggactttctagtgaacttctacgaaggaccaccttttaaattc
aagcaatcccacaggcatcattcaaattttgtcaactgtataaggtattctccagatggg
agcaagttcatcagtgtaagttctgataagaagggtgtgatttacgatggaaaaaccgga
gagaagattggagagctatcctctgaagatggtcataaaggcagcatctatgctgtcagc
tggagtcctgatagtaaacaagtgttgactgtgtctgctgacaagtctgcaaaagtatgg
gagatctctgaagatggtaatggaaaggtgaagaaaactttaacttgtcccggctcagga
ggagtggaagacatgttagtggggtgtctttggcaaaatgatcatcttgtcacgatttct
cttggtggcacagtcagtatattctcagcaagtgatctggataaaggcccattatcgttc
tctggacacatgaagaatgttaattcactagcagtactcaaaagcaatcccaaagttata
ttgtccaccagctatgatggtttaataattaaatggattcaaggaattggatatagcgga
agattggataggaaagagaattctcaaatcaagtgttttgcagcagttgaagaagagatt
gtttcatctggatttgacaacaagatttggagagtttctctacaaggggatcaatgtggg
gatgcagattgcgttgatattggcagtcaaccaaaggacttgagcctttcccttctttct
cctgaactggcactggtttcaactgattcaggagttgttattctccgtggtacaaatgta
gtatcgaccattaaccttgggtttcctgtggctgcatctgtaatctcacctgatggaagt
gaagctataataggtgggcaggatggtaaattacacatatattctgtcacaggtgatact
ttaaaagaagaggcagtacttgagaaacatcgtggtgcaattactgttatacgttattcc
ccagatgtttctatgtttgcatcaggagatgccaatcgagaagctgttgtctgggaccgt
gcttccagagaggtgagggttaagaacatgttgtaccatactgcccgcataaattgcctg
gcctggtctcctgataacagcatggtagctactgggtcactcgacacatgtgtcatcata
tatgagattgacaagccagcatccagccgtgtcaccataaagggagcccacttgggtggg
gtttatggtttagcatttactgacgataccagtgtggtgagttctggcgaagatgcttgt
gttcgagtttggaagttaaccccacaatag
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