KEGG   Vitis riparia (riverbank grape): 117904844
Entry
117904844         CDS       T07274                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03022  Basal transcription factors
vri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117904844
  09124 Replication and repair
   03420 Nucleotide excision repair
    117904844
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:vri01001]
    117904844
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vri03021]
    117904844
   03019 Messenger RNA biogenesis [BR:vri03019]
    117904844
   03400 DNA repair and recombination proteins [BR:vri03400]
    117904844
Enzymes [BR:vri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     117904844
    2.7.11.23  [RNA-polymerase]-subunit kinase
     117904844
Protein kinases [BR:vri01001]
 Serine/threonine kinases: CMGC group
  CDK family
   117904844
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     117904844
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     117904844
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     117904844
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 Seadorna_VP7
Other DBs
NCBI-GeneID: 117904844
NCBI-ProteinID: XP_034673520
LinkDB
Position
17:complement(18123107..18136440)
AA seq 422 aa
MSEVPNVFSKKVADRYLKREVLGEGTYGVVSKAIDTKTGQIVAIKKIRLGKHKEGVNFTA
LREIKLLKELKDPHIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIVLSLADIKSFLQ
MTLKGLAFCHKKWVLHRDMKPNNLLIGDKGQLKLADFGLARIFGSPDRKFTHQVFARWYR
APELLFGSKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKPAQWPD
MVYLPDYVEYQFVPAPPLRSLFPMASDDALDLLSKMFTYDPKARISVQQALEHRYFTSGP
LPTEPAKLPRPHPKRESLNTRVSDFNQQEGPTVLSPPRKSRRVMPQRDGFEENAHQVEKS
DERVNDIRQATGERMSWNEHAPMSIDFSVFGSRPPPRPTINSADKSRLKRKLDLEFQQPD
QD
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtcggaggtcccaaatgttttcagtaagaaagtagccgatcgctaccttaagcgcgaa
gttctcggggaaggtacctatggagtcgtttccaaagccattgatacaaagactggacag
atagttgcaattaagaaaattaggctggggaagcacaaagaaggcgtgaactttacagct
cttcgggaaattaaactgctgaaagaactgaaggatccccatataattgagttaattgat
gcatttcctcacaaggggaacttgcatcttgtgtttgaatttatggagactgaccttgaa
gcagttattcgtgataggaatatagtcctttcgcttgctgacataaagtcattcctgcag
atgacattaaaaggacttgctttttgccacaagaaatgggttttgcatagggatatgaag
ccgaataacttgttgataggagataagggacagcttaaacttgcagattttggattagca
cgtatctttgggagccctgaccgcaagtttactcatcaggtatttgctcgatggtataga
gcacctgagctgttgtttggctccaagcaatatggtcctggggttgatgtttgggctgca
gcttgtatatttgctgaacttctcctccgccgaccttttctacagggttctagtgacatt
gatcaattaggaaagatatttgcggcttttggaacaccaaagcctgctcagtggcctgat
atggtataccttcccgattatgttgaataccaatttgttcctgcaccccctttgcgttca
ttgtttccaatggccagcgatgatgctttagatctgctatcaaagatgttcacatacgat
ccaaaagctagaatttcggtgcagcaggcattagagcacaggtacttcacatctggacct
ctgcctacagaaccagctaagctcccaagacctcaccctaagagagaatctctcaatact
agggtttcagattttaatcagcaggagggtcctactgtgttatctcccccaaggaagtct
aggagagtgatgccacaacgtgatggatttgaagaaaatgctcaccaagttgagaagagt
gatgaacgtgtaaacgatatcagacaggcaactggtgagagaatgagctggaatgaacat
gcaccgatgtcaatagatttttctgttttcggatcaagacccccacctaggcctactatt
aacagtgctgataaatcacgcctaaaaaggaaattagatcttgaattccaacaacctgat
caggactga

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