Vitis riparia (riverbank grape): 117904898
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Entry
117904898 CDS
T07274
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117904898
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
117904898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
nSTAND3
Viral_helicase1
AAA_14
NPHP3_N
NACHT
AAA_5
TIP49
AAA_30
AAA_28
Cytidylate_kin
TsaE
ATPase_2
ABC_tran
RNA_helicase
AAA_2
DUF815
AAA_24
RuvB_N
AAA_33
AAA_11
nSTAND1
AAA_17
Rad17
KAP_NTPase
SRPRB
bpMoxR
PduV-EutP
AAA_7
IstB_IS21
NB-ARC
AAA_19
SLFN-g3_helicase
AAA_3
Mg_chelatase
nSTAND6
NTPase_1
ResIII
Rad51
DnaB_C
CPT
Motif
Other DBs
NCBI-GeneID:
117904898
NCBI-ProteinID:
XP_034673599
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Position
17:complement(8748413..8755721)
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AA seq
455 aa
AA seq
DB search
MSEPMEISLQNATVGDSSDQNGVSESVPSPILTQEKVLVSVEVCLKASSTARSDDVRSAV
ERMLENRSLSYTDGSVPVSLDDPFLVENVQRICICETDEWVEKHDVLLFWQVKPVIHVFQ
LSEEGPCEESSGDGQLSIFNEWILPAKEFDGLWESLIYEPGLKQRLLRYAASALLFTEKG
VNPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNTRYPQCQLVEVNAHSLFSKWFS
ESGKLVAKLFQKIQEMVEEETNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ
LDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTIHARYEILRSCLQELVRAGI
LTNSQECDRLSLLSYTGLKEKLNVAQIEEPGNSHLCKQLLEAAEACEGLSGRSLRKLPFL
AHAALANPYSCDPSKFLCTMTDTAKRECAGLLSES
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgatggagatctctctgcaaaatgccactgtcggcgactcgtcagatcag
aacggagtttcagagtccgttccttctcccattctcacccaagaaaaagttcttgtttcg
gttgaagtttgcttgaaagcctctagcacagccaggagtgatgatgtccggtcagctgtt
gagagaatgcttgaaaataggagtttgagctatactgatggttcagttccagtgtctctt
gatgatccattccttgtggaaaatgtacaaagaatctgtatttgcgaaacagatgaatgg
gtggagaaacatgatgtccttctgttctggcaagtcaaacctgtcatccatgtctttcag
cttagtgaggagggaccatgcgaagaatcaagtggggatggtcagctttctatcttcaat
gaatggattcttcctgctaaggaatttgatggcttgtgggaaagcttaatctatgagccg
ggtctcaagcaaaggttgttgcggtatgcggcaagcgctttgctctttactgagaaaggt
gtcaatcctttccttgtatcatggaaccgcatcattcttttacatggtcctccaggcacg
gggaagacatctttatgtaaagcattggctcaaaaattatcaatacgttttaacaccaga
tacccacagtgccaactggtggaagttaatgcgcattctttgtttagtaaatggttttct
gaaagtggaaagttggttgcaaaattattccaaaaaattcaagaaatggttgaggaagaa
accaatctggtatttgttttgattgatgaagttgaaagcctagctgctgctagaaaggct
gctttatctggctccgagccttcagattctattcgggttgtgaatgctctactgactcaa
ttggacaaactaaaatcttcaccaaatgtgataattctgacaacttccaatattactgca
gctatagatatcgcttttgttgatcgagctgacatcaaagcatatgtgggacctccaaca
attcatgcaagatatgaaatactgagatcctgcctgcaggaactcgtacgagcaggaata
ttgactaattctcaggaatgtgatcgcctttcgcttctgagttacactggtctgaaagag
aagttgaatgtggcacagatagaggagcctggaaattcacatctatgtaaacaattgctg
gaagctgcagaggcatgtgagggtctgagtggaagatcattaagaaagcttcccttctta
gcccatgctgctcttgccaatccatacagttgtgaccctagcaagttcttgtgtacaatg
acagatacagctaaaagggagtgtgccgggttactgtcagaatcatga
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