Vitis riparia (riverbank grape): 117904929
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Entry
117904929 CDS
T07274
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117904929
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117904929
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
117904929
NCBI-ProteinID:
XP_034673641
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Position
17:complement(20187254..20199274)
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AA seq
540 aa
AA seq
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MNGIFNEQILVEKLAKLNSSQKSIETLSHWCIFHRKRAKQVVETWERQFHCSLREQRLSF
LYLANDILQNSRRNGLEFVGEFWKVLPNALRDVVESGDDFGKNAVLRLINIWDERKVFGS
RGQILKEELMGKTVENNDKNNNNNSYSKNLSFRHKHPFQAAVEKIISSYENVYGSPVDEE
TLLSKCRSAIGCIEKAEKEIGGDYSSGQFNGSKYVEELQGQHDILTECIEQLRTAESSRA
SLVSHLKEALQEQEFKLDQVHNQLQVAESQSAHISSIRQQLLNCNRGHMTAEQRDVNAHA
EAPSTFTPETPATGGDKEQSAPVMYTREESFTGKSSSRFEEDPRKSAAAAVAAKLAASTS
SAQMLSYVFSSLASESADGNPKEESPDALPFEKRPKLENLPFSYFPPQHSQQPPLPPFPH
PDSLQNKATATSQMPPQQPPPQLSPQVSHPDLAMHQAAPPPLPTLPQLATPPFMQTAGSM
IGAPYNYTPPLPPPPGFPMPRTPLTAVPYPSPPIPYQNFQGPEGFFSQPPIPATPPISRS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaatatttaatgagcagattttggttgagaagctagccaaactcaatagctca
caaaagagcatagagactttatcacactggtgcattttccataggaagagagcaaaacaa
gttgttgaaacatgggaaagacagttccattgctccctgagggagcagcgactctccttt
ctatatcttgcaaatgatattttgcagaatagtaggcgaaatggtttggagtttgttggt
gaattttggaaggttcttccaaatgctcttcgtgatgtagtagaaagtggagacgatttt
gggaaaaatgctgtgctgcgactgattaatatatgggatgagagaaaggtattcggttct
aggggacaaattctcaaagaagagctcatggggaagactgtggagaataatgataaaaat
aataataacaattcatatagcaagaacttgagctttagacataaacatcctttccaagct
gcagtggaaaaaatcatttcaagttatgaaaatgtatatggtagtccagtggatgaagaa
actctattgagcaaatgcaggagcgctattggttgcattgagaaagcagagaaggagatt
ggtggtgattacagctcagggcaattcaatggatctaaatatgttgaggagttgcaaggg
cagcatgacatactgacagaatgtattgagcaactgagaacagctgaatcatcaagagca
agtctcgtgtctcatttgaaggaggctctccaagagcaggaattcaagctggatcaagtt
cacaatcaacttcaggttgccgagtcacaatcagcacatataagcagcattcggcaacaa
ttgctgaactgcaacagagggcatatgacagcagagcagagggatgttaacgctcatgct
gaggcaccttccactttcactccagaaactccagccactggtggagacaaggaacaatca
gctccggtaatgtacacaagggaggaatctttcactggtaaatcttcttcccgctttgaa
gaagatccacggaaatctgcagctgctgctgtggcagcaaagcttgcagcttcaacctcc
tcggcccaaatgctatcttatgtgttttcctctctggcgtcagaatcggcggatggaaat
ccaaaggaagaatctcctgatgctcttccttttgagaaaaggccaaaacttgaaaacctt
cctttttcctacttcccacctcagcattcccaacaaccaccacttcccccttttccccat
cctgattcgctccaaaacaaggcgacagctacctcgcaaatgcctccgcagcagccacct
ccccaactgtcccctcaggtgtcacatccagatctggccatgcatcaggcagcaccacct
ccgctaccaactctcccacagctagccacgccaccatttatgcagacagctggatctatg
ataggtgcaccgtacaactatacaccaccactgcctccacctcctggctttccaatgcct
agaaccccactaactgctgtcccttatccttctccgccgattccataccagaattttcag
gggccagaaggtttcttcagtcagccgcccataccagcaacacctccaatttcgaggtcc
tag
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