Vitis riparia (riverbank grape): 117904930
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Entry
117904930 CDS
T07274
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117904930
Enzymes [BR:
vri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
117904930
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117904930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
117904930
NCBI-ProteinID:
XP_034673642
LinkDB
All DBs
Position
17:20174343..20185442
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AA seq
386 aa
AA seq
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MKRRRDEAAEMEIVWQTPANPPERRDYIFRNGKRYVRPYYFEFISHVKNRWAGKTIVDLF
TEEFKGRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQ
KEPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSA
SKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPL
KGKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFAVDRST
KGLSADRDAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLAPKGYDEDEEG
LWLHCVRYSGPDWVYECPHPEWASHD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaggagagatgaggcggcggagatggagattgtgtggcagaccccagcgaac
ccgccggagcgccgtgattacatattccgcaatgggaaacgctacgtcagaccttactac
ttcgagttcatctctcatgttaagaatcgttgggcgggaaaaaccatcgtcgatttgttc
accgaagagttcaaaggacgaccttatgattattacgttaatgctgtccaatcgggaagg
atacaagttgatggagagatggtgcctgtttcgtacatagtccgatcatcgcaaaagata
agccactttgtacacaggcatgaaccaccagtgttggcgttggatgtctcagttttgcag
aaagaaccagatgttttaaccatttgtaagccagcatctgttccagtgcatccatgtggt
caataccgtaaaaacactgttgttggcatccttcaggcggagcatggcttggcacctcta
tttccgatccataggctagaccgcctagtttcaggactcctgatcttggccagaagtgct
tctaaggctgacagttttaggcaacagattgaagctgggatggtgcagaaacagtatatt
gcaaaggtcactggggtatttcctgatgatgagcaagttgtcaatgtgaatgtaaattat
aatgctcgggaaggaagaagcacagtagaggttggcaactgttgtggcaatactcccttg
aagggaaagtcagcctgtacaaagtttactaggattagtaccaatggaactcatagcatt
gttttgtgtgaaccaatcactggtcgaactcatcaaattcgagttcatttacaatataca
ggccatccaatagccaatgatatgctctacctctccgaatttgctgttgatcgttctact
aaaggattgagtgctgatagagatgcagctaattcaggctgttctctgccatccagttct
cccaaaagttgtgttgacgaatattgtgatgataattccactgtagatttcagcattgat
cctatgtgtacaaattgtccaaatttggcccctaaaggatatgatgaggatgaagagggt
ttatggttacactgcgttagatactccgggcctgattgggtttatgaatgcccacatcca
gagtgggcatcgcatgactaa
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