Vitis riparia (riverbank grape): 117905043
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Entry
117905043 CDS
T07274
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117905043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117905043
03036 Chromosome and associated proteins [BR:
vri03036
]
117905043
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117905043
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117905043
PBAF complex
117905043
GBAF(ncBAF) complex
117905043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
117905043
NCBI-ProteinID:
XP_034673805
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All DBs
Position
17:19701758..19705236
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AA seq
548 aa
AA seq
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MAMSANHNKTPGKSVGLGSVSSGNVGQTMPLNHQPHLLSQSQPQTLGGTHFPGHFQLSEP
QAQALAQTQYAQAHAQAQAQAAHAQFQAQLQAQAQSLAQLHSAGTSNLGVSSPSVSTPGT
GSVKRGSQKPPSRPHGSANATNPASPFKTMELTPAARRKKPKLPEKQIPDKIAALVPESA
IYTQLVELEARVDAALARKKTDIQESLKNPHRVQKTLRIYVFNTFANQTRMNPEKTNAEP
PSWTLKIIGRILEDGVDPVLAGTSDKLSSSYPKFSSFFKKMTIYLDQGLYPDNHVILWEN
ARSPTLHEGFEVQRKGDKEFNAIIRLEMNYVPEKFKLSTALSEVLGLEVDTRPRIVAAIW
HYVKSRKLQNPNDPSFFVCDPPLRKVFGEEKIKFAMVPQKISHHLSPPQPIHLEHKVKLS
GNSPAGTTCYDVLVDVPLPLEKEMSAFLANTERHKEIDAYDETICASIKKIQEHNRRRAF
FLGFSHSPAEFINALITSQSRDLKLVAGDASRNAEKERRADFYNQPWVDDAVIRYLNRKP
APGMEALE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtcggcgaatcacaataaaacccccggaaagagtgttggattgggatcagtt
agcagtggaaatgtggggcaaacaatgcccctgaaccaccaaccccatcttctctctcag
tcacaacctcaaacacttggtgggactcactttcctggtcattttcagttgtctgagcca
caggcacaggctttagcacaaacccagtatgcgcaagcacatgcgcaagcgcaggctcaa
gcggctcatgcccaattccaagctcagttgcaggctcaagctcagtcccttgcccagttg
catagcgctgggactagtaatttgggcgtttcctcgccctctgtttcgaccccaggtacg
gggagtgtcaagcggggtagtcagaaaccaccttcacggcctcatggttcggccaatgct
actaatccagcttctccatttaagaccatggagctgacccctgcagcccggaggaagaag
ccaaagcttccagaaaagcaaatacctgataaaattgctgccctagtgccggagtctgct
atttatacacagttggttgaattggaggcccgggtggatgctgctcttgcaagaaagaag
actgatatccaagagtccctcaaaaaccctcatcgtgttcagaaaacacttcggatttat
gttttcaatacttttgcaaatcagacaagaatgaacccggagaaaacaaacgcagagcct
ccttcatggacacttaagataattgggaggatcttggaagatggggtagatcctgtcctt
gcaggaactagtgataaattgagctcttcatacccaaaattttcatctttctttaagaaa
atgactatttacttggaccagggcctttatccagataaccatgtaattttatgggagaat
gctcggtctcctacacttcatgagggctttgaagtgcaaagaaagggggataaagaattc
aatgcaataataagattagaaatgaattatgtacctgaaaaatttaaactttcaacagcc
ctgtcggaagttcttggacttgaggtagatacacgcccaaggattgtagctgcaatctgg
cactatgtgaagagtaggaagttacagaacccgaatgacccctcattctttgtgtgtgat
ccacctcttcgtaaagtatttggtgaagagaaaataaaatttgccatggttccacaaaag
atatcacatcatttgtctcccccacaacctatacatttggagcataaggtcaagctttca
gggaatagtccagctggaactacgtgttatgatgtgttggttgatgtaccccttccatta
gagaaggaaatgtctgctttcttggcaaacactgagaggcataaagagattgatgcctat
gatgaaacaatttgcgcttctataaagaagattcaagagcacaatcgaaggcgggctttc
ttccttggtttcagtcactctccagcagagtttattaatgctttgataacttctcaaagc
agggatctaaaacttgttgcaggagatgcaagtcgtaatgctgaaaaggagcggcgagct
gacttctataaccaaccttgggttgatgatgctgttatccgctacttgaaccgcaagcct
gctcccggaatggaagcacttgaatag
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